RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
CNN1-201ENST00000252456 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
CNN1-201ENST00000252456 PTPRCP08575 1304 aa18.11■□□□□ 0.49
CNN1-201ENST00000252456 PDE8AO60658 829 aa18.11■□□□□ 0.49
CNN1-201ENST00000252456 RARSP54136 660 aaKnown RBP18.11■□□□□ 0.49
CNN1-201ENST00000252456 GRAPQ13588 217 aa18.11■□□□□ 0.49
CNN1-201ENST00000252456 DDX46Q7L014 1031 aaKnown RBP18.11■□□□□ 0.49
CNN1-201ENST00000252456 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
CNN1-201ENST00000252456 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
CNN1-201ENST00000252456 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
CNN1-201ENST00000252456 ATP6V0A2Q9Y487 856 aa18.1■□□□□ 0.49
CNN1-201ENST00000252456 LTBP1Q14766 1721 aa18.1■□□□□ 0.49
CNN1-201ENST00000252456 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 BBOX1O75936 387 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
CNN1-201ENST00000252456 CTSWP56202 376 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 FKBP4Q02790 459 aaKnown RBP eCLIP18.09■□□□□ 0.49
CNN1-201ENST00000252456 RTKN2Q8IZC4 609 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
CNN1-201ENST00000252456 COL4A5P29400 1685 aa18.08■□□□□ 0.49
CNN1-201ENST00000252456 SPEF2Q9C093 1822 aa18.08■□□□□ 0.49
CNN1-201ENST00000252456 SLC4A10Q6U841 1118 aa18.08■□□□□ 0.48
CNN1-201ENST00000252456 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.48
CNN1-201ENST00000252456 PSMD1Q99460 953 aa18.08■□□□□ 0.48
CNN1-201ENST00000252456 PLA2G12BQ9BX93 195 aa18.08■□□□□ 0.48
CNN1-201ENST00000252456 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
CNN1-201ENST00000252456 SP8Q8IXZ3 490 aa18.07■□□□□ 0.48
CNN1-201ENST00000252456 CCDC85AQ96PX6 553 aaPredicted RBP18.07■□□□□ 0.48
CNN1-201ENST00000252456 ZC3H4Q9UPT8 1303 aaKnown RBP18.07■□□□□ 0.48
CNN1-201ENST00000252456 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
CNN1-201ENST00000252456 GRM8O00222 908 aa18.06■□□□□ 0.48
CNN1-201ENST00000252456 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
CNN1-201ENST00000252456 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
CNN1-201ENST00000252456 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
CNN1-201ENST00000252456 ZNF526Q8TF50 670 aaPredicted RBP18.05■□□□□ 0.48
CNN1-201ENST00000252456 GREM2Q9H772 168 aa18.05■□□□□ 0.48
CNN1-201ENST00000252456 NOB1Q9ULX3 412 aaKnown RBP18.05■□□□□ 0.48
CNN1-201ENST00000252456 GRIPAP1Q4V328 841 aa18.05■□□□□ 0.48
CNN1-201ENST00000252456 TMC4Q7Z404 712 aa18.05■□□□□ 0.48
CNN1-201ENST00000252456 RPS8P62241 208 aaKnown RBP18.04■□□□□ 0.48
CNN1-201ENST00000252456 UTYO14607 1347 aa18.04■□□□□ 0.48
CNN1-201ENST00000252456 BCAR3O75815 825 aa18.03■□□□□ 0.48
CNN1-201ENST00000252456 CSF1RP07333 972 aa18.03■□□□□ 0.48
CNN1-201ENST00000252456 FOXO4P98177 505 aa18.03■□□□□ 0.48
CNN1-201ENST00000252456 EPHA10Q5JZY3 1008 aa18.03■□□□□ 0.48
CNN1-201ENST00000252456 RTFDC1Q9BY42 306 aaPredicted RBP18.03■□□□□ 0.48
CNN1-201ENST00000252456 NBPF7P0C2Y1 421 aaPredicted RBP18.02■□□□□ 0.48
CNN1-201ENST00000252456 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
CNN1-201ENST00000252456 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
CNN1-201ENST00000252456 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
CNN1-201ENST00000252456 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
CNN1-201ENST00000252456 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
CNN1-201ENST00000252456 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
CNN1-201ENST00000252456 MPNDQ8N594 471 aa18.01■□□□□ 0.47
CNN1-201ENST00000252456 A0A1B0GUL6 1792 aa18■□□□□ 0.47
CNN1-201ENST00000252456 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
CNN1-201ENST00000252456 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
CNN1-201ENST00000252456 API5Q9BZZ5 524 aaKnown RBP18■□□□□ 0.47
CNN1-201ENST00000252456 USP44Q9H0E7 712 aa18■□□□□ 0.47
CNN1-201ENST00000252456 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
CNN1-201ENST00000252456 WDR90Q96KV7 1748 aa18■□□□□ 0.47
CNN1-201ENST00000252456 GLTPD2A6NH11 291 aa17.99■□□□□ 0.47
CNN1-201ENST00000252456 GPSM2P81274 684 aa17.99■□□□□ 0.47
CNN1-201ENST00000252456 SUCLG2Q96I99 432 aa17.99■□□□□ 0.47
CNN1-201ENST00000252456 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
CNN1-201ENST00000252456 TMX4Q9H1E5 349 aaPredicted RBP17.99■□□□□ 0.47
CNN1-201ENST00000252456 TNNQ9UQP3 1299 aa17.99■□□□□ 0.47
CNN1-201ENST00000252456 KIF3CO14782 793 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 TRIM27P14373 513 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 ITGA6P23229 1130 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 ANKRD18AQ8IVF6 992 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 FZD9O00144 591 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 AOC3Q16853 763 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
CNN1-201ENST00000252456 NSFL1CQ9UNZ2 370 aaKnown RBP17.98■□□□□ 0.47
CNN1-201ENST00000252456 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
CNN1-201ENST00000252456 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
CNN1-201ENST00000252456 PODXL2Q9NZ53 605 aa17.97■□□□□ 0.47
CNN1-201ENST00000252456 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
CNN1-201ENST00000252456 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
CNN1-201ENST00000252456 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
CNN1-201ENST00000252456 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
CNN1-201ENST00000252456 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
CNN1-201ENST00000252456 VPS33BQ9H267 617 aa17.96■□□□□ 0.47
CNN1-201ENST00000252456 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
CNN1-201ENST00000252456 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
CNN1-201ENST00000252456 ANKRD44Q8N8A2 993 aa17.95■□□□□ 0.46
CNN1-201ENST00000252456 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
CNN1-201ENST00000252456 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
CNN1-201ENST00000252456 MINPP1Q9UNW1 487 aa17.95■□□□□ 0.46
CNN1-201ENST00000252456 POTECB2RU33 542 aa17.94■□□□□ 0.46
CNN1-201ENST00000252456 DDNO94850 711 aaPredicted RBP17.94■□□□□ 0.46
CNN1-201ENST00000252456 INTS3Q68E01 1043 aaKnown RBP17.94■□□□□ 0.46
CNN1-201ENST00000252456 JDP2Q8WYK2 163 aa17.94■□□□□ 0.46
CNN1-201ENST00000252456 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
CNN1-201ENST00000252456 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
CNN1-201ENST00000252456 DPY19L2Q6NUT2 758 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 364.1 ms