RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 FBXO3Q9UK99 471 aa21.07■□□□□ 0.96
PCCB-201ENST00000251654 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 CCDC85AQ96PX6 553 aaPredicted RBP21.06■□□□□ 0.96
PCCB-201ENST00000251654 PUS3Q9BZE2 481 aaKnown RBP21.06■□□□□ 0.96
PCCB-201ENST00000251654 GREM2Q9H772 168 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 GPR108Q9NPR9 543 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 LRP5O75197 1615 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 ZNF609O15014 1411 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 PDE8AO60658 829 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 IFIT5Q13325 482 aaKnown RBP21.06■□□□□ 0.96
PCCB-201ENST00000251654 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 SH3TC1Q8TE82 1336 aa21.06■□□□□ 0.96
PCCB-201ENST00000251654 RGL2O15211 777 aa21.05■□□□□ 0.96
PCCB-201ENST00000251654 BECN1Q14457 450 aa21.05■□□□□ 0.96
PCCB-201ENST00000251654 AK7Q96M32 723 aa21.05■□□□□ 0.96
PCCB-201ENST00000251654 TBC1D2Q9BYX2 928 aa21.05■□□□□ 0.96
PCCB-201ENST00000251654 DAXXQ9UER7 740 aaPredicted RBP21.05■□□□□ 0.96
PCCB-201ENST00000251654 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
PCCB-201ENST00000251654 C4AP0C0L4 1744 aa21.05■□□□□ 0.96
PCCB-201ENST00000251654 RPS6KA4O75676 772 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 NTSR2O95665 410 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 UTP14AQ9BVJ6 771 aaKnown RBP21.04■□□□□ 0.96
PCCB-201ENST00000251654 IL25Q9H293 177 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 ITGA6P23229 1130 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 KRT27Q7Z3Y8 459 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 DBNDD2Q9BQY9 259 aa21.04■□□□□ 0.96
PCCB-201ENST00000251654 GNPATO15228 680 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 ATP5JP18859 108 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 FAM196AQ6ZSG2 479 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 SMIM5Q71RC9 77 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 AMIGO3Q86WK7 504 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 EVI5LQ96CN4 794 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 RIC1Q4ADV7 1423 aa21.03■□□□□ 0.96
PCCB-201ENST00000251654 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
PCCB-201ENST00000251654 BCL2L12Q9HB09 334 aa21.01■□□□□ 0.95
PCCB-201ENST00000251654 CASZ1Q86V15 1759 aa21.01■□□□□ 0.95
PCCB-201ENST00000251654 FAM177BA6PVY3 158 aa21.01■□□□□ 0.95
PCCB-201ENST00000251654 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
PCCB-201ENST00000251654 ZNF772Q68DY9 489 aaPredicted RBP21.01■□□□□ 0.95
PCCB-201ENST00000251654 BOLA2Q9H3K6 86 aa21.01■□□□□ 0.95
PCCB-201ENST00000251654 NARFQ9UHQ1 456 aa21.01■□□□□ 0.95
PCCB-201ENST00000251654 ANKRD18BA2A2Z9 1011 aa21■□□□□ 0.95
PCCB-201ENST00000251654 SGSM2O43147 1006 aa21■□□□□ 0.95
PCCB-201ENST00000251654 TAF7LQ5H9L4 462 aa21■□□□□ 0.95
PCCB-201ENST00000251654 LRRC4BQ9NT99 713 aa21■□□□□ 0.95
PCCB-201ENST00000251654 TIMM10P62072 90 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 RBM6P78332 1123 aaKnown RBP20.99■□□□□ 0.95
PCCB-201ENST00000251654 CEP126Q9P2H0 1117 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
PCCB-201ENST00000251654 RIPOR2Q9Y4F9 1068 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 UBR3Q6ZT12 1888 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 A0A1B0GUL7 405 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
PCCB-201ENST00000251654 SNX21Q969T3 373 aa20.98■□□□□ 0.95
PCCB-201ENST00000251654 RTL9Q8NET4 1388 aa20.98■□□□□ 0.95
PCCB-201ENST00000251654 EPB41L2O43491 1005 aaKnown RBP20.97■□□□□ 0.95
PCCB-201ENST00000251654 USPL1Q5W0Q7 1092 aa20.97■□□□□ 0.95
PCCB-201ENST00000251654 CWC27Q6UX04 472 aaKnown RBP20.97■□□□□ 0.95
PCCB-201ENST00000251654 LDHAL6AQ6ZMR3 332 aa20.97■□□□□ 0.95
PCCB-201ENST00000251654 NEUROD6Q96NK8 337 aa20.97■□□□□ 0.95
PCCB-201ENST00000251654 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
PCCB-201ENST00000251654 TBC1D9BQ66K14 1250 aa20.97■□□□□ 0.95
PCCB-201ENST00000251654 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
PCCB-201ENST00000251654 TRIM37O94972 964 aa20.96■□□□□ 0.95
PCCB-201ENST00000251654 HSP90B1P14625 803 aaKnown RBP20.96■□□□□ 0.95
PCCB-201ENST00000251654 VGLL2Q8N8G2 317 aa20.96■□□□□ 0.95
PCCB-201ENST00000251654 ARHGEF1Q92888 912 aaKnown RBP20.96■□□□□ 0.95
PCCB-201ENST00000251654 HAUS7Q99871 368 aa20.96■□□□□ 0.95
PCCB-201ENST00000251654 SPEF2Q9C093 1822 aa20.95■□□□□ 0.94
PCCB-201ENST00000251654 EDC3Q96F86 508 aaKnown RBP20.95■□□□□ 0.94
PCCB-201ENST00000251654 AKAP2Q9Y2D5 859 aa20.95■□□□□ 0.94
PCCB-201ENST00000251654 CD2BP2O95400 341 aaKnown RBP20.94■□□□□ 0.94
PCCB-201ENST00000251654 RABEP1Q15276 862 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 RAD50Q92878 1312 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 ZPR1O75312 459 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 FSD1Q9BTV5 496 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 CNNM1Q9NRU3 951 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 NDUFB9Q9Y6M9 179 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 COL4A1P02462 1669 aa20.94■□□□□ 0.94
PCCB-201ENST00000251654 RFX7Q2KHR2 1363 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 HIP1O00291 1037 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 ERFEQ4G0M1 354 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 METTL24Q5JXM2 366 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 RUFY2Q8WXA3 655 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 LSG1Q9H089 658 aaKnown RBP20.93■□□□□ 0.94
PCCB-201ENST00000251654 ARAP2Q8WZ64 1704 aa20.93■□□□□ 0.94
PCCB-201ENST00000251654 IL17RAQ96F46 866 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 SEC31BQ9NQW1 1179 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 ABCC12Q96J65 1359 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 ADORA1P30542 326 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 XAGE2Q96GT9 111 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 FAM227BQ96M60 508 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 DNAJC2Q99543 621 aaKnown RBP20.92■□□□□ 0.94
PCCB-201ENST00000251654 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
PCCB-201ENST00000251654 PALD1Q9ULE6 856 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms