RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
LRRC4-201ENST00000249363 HMMRO75330 724 aa11.39□□□□□ -0.59
LRRC4-201ENST00000249363 CARMIL3Q8ND23 1372 aa11.39□□□□□ -0.59
LRRC4-201ENST00000249363 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
LRRC4-201ENST00000249363 UTP14AQ9BVJ6 771 aaKnown RBP11.39□□□□□ -0.59
LRRC4-201ENST00000249363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
LRRC4-201ENST00000249363 NFIXQ14938 502 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 ZPR1O75312 459 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 PHF14O94880 888 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 RFC4P35249 363 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
LRRC4-201ENST00000249363 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
LRRC4-201ENST00000249363 PDE8AO60658 829 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 CTSWP56202 376 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
LRRC4-201ENST00000249363 SASH1O94885 1247 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 DDR1Q08345 913 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 POLRMTO00411 1230 aaKnown RBP11.37□□□□□ -0.59
LRRC4-201ENST00000249363 RAB11FIP3O75154 756 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 BAG6P46379 1132 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
LRRC4-201ENST00000249363 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
LRRC4-201ENST00000249363 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
LRRC4-201ENST00000249363 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
LRRC4-201ENST00000249363 EXOC6BQ9Y2D4 811 aa11.36□□□□□ -0.59
LRRC4-201ENST00000249363 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRRC4-201ENST00000249363 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
LRRC4-201ENST00000249363 KLRG2A4D1S0 409 aaPredicted RBP11.36□□□□□ -0.59
LRRC4-201ENST00000249363 CIAO1O76071 339 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
LRRC4-201ENST00000249363 KLHDC4Q8TBB5 520 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
LRRC4-201ENST00000249363 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
LRRC4-201ENST00000249363 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 GREM2Q9H772 168 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
LRRC4-201ENST00000249363 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 ARXQ96QS3 562 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 PLEKHM2Q8IWE5 1019 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
LRRC4-201ENST00000249363 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
LRRC4-201ENST00000249363 PRR5LQ6MZQ0 368 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 C16orf71Q8IYS4 520 aaPredicted RBP11.34□□□□□ -0.59
LRRC4-201ENST00000249363 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
LRRC4-201ENST00000249363 ZNF609O15014 1411 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 OTUD7AQ8TE49 926 aaPredicted RBP11.33□□□□□ -0.6
LRRC4-201ENST00000249363 LRRCC1Q9C099 1032 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
LRRC4-201ENST00000249363 CRY2Q49AN0 593 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 CACNA1SQ13698 1873 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
LRRC4-201ENST00000249363 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
LRRC4-201ENST00000249363 ITGA6P23229 1130 aa11.32□□□□□ -0.6
LRRC4-201ENST00000249363 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
LRRC4-201ENST00000249363 ZNF594Q96JF6 807 aaPredicted RBP11.32□□□□□ -0.6
LRRC4-201ENST00000249363 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
LRRC4-201ENST00000249363 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
LRRC4-201ENST00000249363 EYA2O00167 538 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
LRRC4-201ENST00000249363 GPR108Q9NPR9 543 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 ZNF646O15015 1829 aaPredicted RBP11.31□□□□□ -0.6
LRRC4-201ENST00000249363 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 SERPINB2P05120 415 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
LRRC4-201ENST00000249363 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
LRRC4-201ENST00000249363 AOX1Q06278 1338 aa11.31□□□□□ -0.6
LRRC4-201ENST00000249363 HSP90B1P14625 803 aaKnown RBP11.3□□□□□ -0.6
LRRC4-201ENST00000249363 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
LRRC4-201ENST00000249363 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
LRRC4-201ENST00000249363 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
LRRC4-201ENST00000249363 PI4K2BQ8TCG2 481 aa11.3□□□□□ -0.6
LRRC4-201ENST00000249363 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
LRRC4-201ENST00000249363 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
LRRC4-201ENST00000249363 IL15P40933 162 aaPredicted RBP11.29□□□□□ -0.6
LRRC4-201ENST00000249363 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
LRRC4-201ENST00000249363 PDE1AP54750 535 aa11.29□□□□□ -0.6
LRRC4-201ENST00000249363 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
LRRC4-201ENST00000249363 MYH7P12883 1935 aa11.29□□□□□ -0.6
LRRC4-201ENST00000249363 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms