RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 A0A1B0GUL6 1792 aa16.29■□□□□ 0.2
VPREB3-201ENST00000248948 LINS1Q8NG48 757 aa16.29■□□□□ 0.2
VPREB3-201ENST00000248948 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
VPREB3-201ENST00000248948 BBOX1O75936 387 aa16.28■□□□□ 0.2
VPREB3-201ENST00000248948 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
VPREB3-201ENST00000248948 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
VPREB3-201ENST00000248948 RTL9Q8NET4 1388 aa16.27■□□□□ 0.2
VPREB3-201ENST00000248948 PDE8AO60658 829 aa16.27■□□□□ 0.2
VPREB3-201ENST00000248948 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
VPREB3-201ENST00000248948 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.2
VPREB3-201ENST00000248948 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
VPREB3-201ENST00000248948 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
VPREB3-201ENST00000248948 COL4A5P29400 1685 aa16.27■□□□□ 0.19
VPREB3-201ENST00000248948 PTPRCP08575 1304 aa16.26■□□□□ 0.19
VPREB3-201ENST00000248948 GCKRQ14397 625 aa16.26■□□□□ 0.19
VPREB3-201ENST00000248948 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
VPREB3-201ENST00000248948 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
VPREB3-201ENST00000248948 IARSP41252 1262 aaKnown RBP16.25■□□□□ 0.19
VPREB3-201ENST00000248948 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
VPREB3-201ENST00000248948 PSME4Q14997 1843 aa16.24■□□□□ 0.19
VPREB3-201ENST00000248948 GLTPD2A6NH11 291 aa16.24■□□□□ 0.19
VPREB3-201ENST00000248948 CTSWP56202 376 aa16.24■□□□□ 0.19
VPREB3-201ENST00000248948 BEND3Q5T5X7 828 aa16.24■□□□□ 0.19
VPREB3-201ENST00000248948 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
VPREB3-201ENST00000248948 ZNF277Q9NRM2 450 aaPredicted RBP16.24■□□□□ 0.19
VPREB3-201ENST00000248948 H7C1W4 665 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 KIF3CO14782 793 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPREB3-201ENST00000248948 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 SUPT20HQ8NEM7 779 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 CELF1Q92879 486 aaKnown RBP16.23■□□□□ 0.19
VPREB3-201ENST00000248948 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
VPREB3-201ENST00000248948 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
VPREB3-201ENST00000248948 F6X3S4 739 aa16.22■□□□□ 0.19
VPREB3-201ENST00000248948 CASP7P55210 303 aa16.22■□□□□ 0.19
VPREB3-201ENST00000248948 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
VPREB3-201ENST00000248948 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
VPREB3-201ENST00000248948 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
VPREB3-201ENST00000248948 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
VPREB3-201ENST00000248948 MPNDQ8N594 471 aa16.2■□□□□ 0.18
VPREB3-201ENST00000248948 JDP2Q8WYK2 163 aa16.2■□□□□ 0.18
VPREB3-201ENST00000248948 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
VPREB3-201ENST00000248948 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
VPREB3-201ENST00000248948 SRCIN1Q9C0H9 1055 aa16.2■□□□□ 0.18
VPREB3-201ENST00000248948 ADAMTSL1Q8N6G6 1762 aa16.2■□□□□ 0.18
VPREB3-201ENST00000248948 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 FZD9O00144 591 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 GRM8O00222 908 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
VPREB3-201ENST00000248948 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
VPREB3-201ENST00000248948 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
VPREB3-201ENST00000248948 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
VPREB3-201ENST00000248948 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
VPREB3-201ENST00000248948 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
VPREB3-201ENST00000248948 GREM2Q9H772 168 aa16.18■□□□□ 0.18
VPREB3-201ENST00000248948 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
VPREB3-201ENST00000248948 TOMM70O94826 608 aa16.17■□□□□ 0.18
VPREB3-201ENST00000248948 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
VPREB3-201ENST00000248948 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
VPREB3-201ENST00000248948 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
VPREB3-201ENST00000248948 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
VPREB3-201ENST00000248948 UTYO14607 1347 aa16.17■□□□□ 0.18
VPREB3-201ENST00000248948 CSF1RP07333 972 aa16.16■□□□□ 0.18
VPREB3-201ENST00000248948 VEGFAP15692 232 aaPredicted RBP16.16■□□□□ 0.18
VPREB3-201ENST00000248948 AOC3Q16853 763 aa16.16■□□□□ 0.18
VPREB3-201ENST00000248948 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
VPREB3-201ENST00000248948 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
VPREB3-201ENST00000248948 GPC2Q8N158 579 aa16.16■□□□□ 0.18
VPREB3-201ENST00000248948 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
VPREB3-201ENST00000248948 SCN9AQ15858 1988 aa16.15■□□□□ 0.18
VPREB3-201ENST00000248948 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
VPREB3-201ENST00000248948 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
VPREB3-201ENST00000248948 EIF6P56537 245 aaKnown RBP16.15■□□□□ 0.18
VPREB3-201ENST00000248948 GPSM2P81274 684 aa16.15■□□□□ 0.18
VPREB3-201ENST00000248948 RBM46Q8TBY0 533 aaKnown RBP16.15■□□□□ 0.18
VPREB3-201ENST00000248948 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
VPREB3-201ENST00000248948 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
VPREB3-201ENST00000248948 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
VPREB3-201ENST00000248948 XDHP47989 1333 aa16.15■□□□□ 0.18
VPREB3-201ENST00000248948 DDNO94850 711 aaPredicted RBP16.14■□□□□ 0.17
VPREB3-201ENST00000248948 ITGA6P23229 1130 aa16.14■□□□□ 0.17
VPREB3-201ENST00000248948 EYA3Q99504 573 aa16.14■□□□□ 0.17
VPREB3-201ENST00000248948 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
VPREB3-201ENST00000248948 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
VPREB3-201ENST00000248948 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
VPREB3-201ENST00000248948 FOXO4P98177 505 aa16.13■□□□□ 0.17
VPREB3-201ENST00000248948 TBC1D16Q8TBP0 767 aa16.13■□□□□ 0.17
VPREB3-201ENST00000248948 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
VPREB3-201ENST00000248948 POTECB2RU33 542 aa16.12■□□□□ 0.17
VPREB3-201ENST00000248948 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms