RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 NGEFQ8N5V2 710 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 GGA1Q9UJY5 639 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 RREB1Q92766 1687 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 C21orf2O43822 256 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 FARP2O94887 1054 aaPredicted RBP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 TBC1D8O95759 1140 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 CNGA1P29973 690 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 TMEM132EQ6IEE7 984 aa4.37□□□□□ -1.71
PHTF2-201ENST00000248550 NIP7Q9Y221 180 aaKnown RBP eCLIP4.37□□□□□ -1.71
PHTF2-201ENST00000248550 EDC4Q6P2E9 1401 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 IARSP41252 1262 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 LARP1Q6PKG0 1096 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 CNNM1Q9NRU3 951 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 MROH7-TTC4A0A0A0MT08 1334 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 MROH7Q68CQ1 1323 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 ABCA3Q99758 1704 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 PLCG2P16885 1265 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 WAPLQ7Z5K2 1190 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 ANKRD18AQ8IVF6 992 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 CAMKK2Q96RR4 588 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 BRIP1Q9BX63 1249 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 TOPAZ1Q8N9V7 1692 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 LOC102724428A0A0B4J2F2 783 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 TRPA1O75762 1119 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 IFIT1P09914 478 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 GTF2A2P52657 109 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 SIK1P57059 783 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 AP5M1Q9H0R1 490 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 EHMT1Q9H9B1 1298 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 TRPM3Q9HCF6 1732 aaPredicted RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 PHRF1Q9P1Y6 1649 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 KIAA0232Q92628 1395 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 TNPO2O14787 897 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 HTATSF1O43719 755 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 CACNB1Q02641 598 aaPredicted RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 DZIP3Q86Y13 1208 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 SPRYD3Q8NCJ5 442 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 PPP4R2Q9NY27 417 aa4.36□□□□□ -1.71
PHTF2-201ENST00000248550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.36□□□□□ -1.713e-6■■■■□ 20.6
PHTF2-201ENST00000248550 TRMT112Q9UI30 125 aaKnown RBP4.36□□□□□ -1.71
PHTF2-201ENST00000248550 CDHR2Q9BYE9 1310 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 IRS2Q9Y4H2 1338 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 CAPN8A6NHC0 703 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 NBPF26B4DH59 902 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 BRPF1P55201 1214 aaPredicted RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 FKBP4Q02790 459 aaKnown RBP eCLIP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 MAP2K5Q13163 448 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 PUS10Q3MIT2 529 aaKnown RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 RPUSD2Q8IZ73 545 aaKnown RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 IP6K1Q92551 441 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 RRP7AQ9Y3A4 280 aaKnown RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 PPP2R3BQ9Y5P8 575 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 CPSF1Q10570 1443 aaKnown RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 MYO5BQ9ULV0 1848 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 CLSTN1O94985 981 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 DPEP1P16444 411 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 ATP2B4P23634 1241 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 SOX10P56693 466 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 VPS53Q5VIR6 699 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 MFSD14AQ96MC6 490 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 TBC1D2BQ9UPU7 963 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 MAP3K19Q56UN5 1328 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 ZBBXA8MT70 800 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 SEC24BO95487 1268 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 IGFBP4P22692 258 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 EPHA10Q5JZY3 1008 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 GPC2Q8N158 579 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 SYNE4Q8N205 404 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 TBC1D22AQ8WUA7 517 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 DRC1Q96MC2 740 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 POP1Q99575 1024 aaKnown RBP4.35□□□□□ -1.71
PHTF2-201ENST00000248550 TBC1D2Q9BYX2 928 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 NRKQ7Z2Y5 1582 aa4.35□□□□□ -1.71
PHTF2-201ENST00000248550 M0QZ92 97 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 BAG3O95817 575 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 ZC3H14Q6PJT7 736 aaKnown RBP4.34□□□□□ -1.71
PHTF2-201ENST00000248550 SEZ6LQ9BYH1 1024 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 MARCH6O60337 910 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 ATP2B2Q01814 1243 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 NAA30Q147X3 362 aaPredicted RBP4.34□□□□□ -1.71
PHTF2-201ENST00000248550 APBB1IPQ7Z5R6 666 aaPredicted RBP4.34□□□□□ -1.71
PHTF2-201ENST00000248550 RAB11FIP4Q86YS3 637 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 CNPY2Q9Y2B0 182 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 ALADP13716 330 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 RUBCNLQ9H714 662 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 DPP7Q9UHL4 492 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 ZNRF3Q9ULT6 936 aa4.34□□□□□ -1.71
PHTF2-201ENST00000248550 SNRPA1P09661 255 aaKnown RBP4.34□□□□□ -1.72
PHTF2-201ENST00000248550 SNAPC2Q13487 334 aa4.34□□□□□ -1.72
PHTF2-201ENST00000248550 WASHC4Q2M389 1173 aa4.34□□□□□ -1.72
PHTF2-201ENST00000248550 SPOUT1Q5T280 376 aaKnown RBP4.34□□□□□ -1.72
PHTF2-201ENST00000248550 SAMD1Q6SPF0 538 aaPredicted RBP4.34□□□□□ -1.72
PHTF2-201ENST00000248550 MICALL1Q8N3F8 863 aa4.34□□□□□ -1.72
PHTF2-201ENST00000248550 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.72
PHTF2-201ENST00000248550 PALLDQ8WX93 1383 aa4.34□□□□□ -1.72
PHTF2-201ENST00000248550 POLR3DP05423 398 aaPredicted RBP4.33□□□□□ -1.72
PHTF2-201ENST00000248550 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
PHTF2-201ENST00000248550 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.721e-7■■■■■ 44.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms