RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ATP8B2P98198 1209 aa20.89■□□□□ 0.94
CDKN1A-201ENST00000244741 ANKRD45Q5TZF3 282 aa20.89■□□□□ 0.94
CDKN1A-201ENST00000244741 RPAP2Q8IXW5 612 aaPredicted RBP20.89■□□□□ 0.94
CDKN1A-201ENST00000244741 GCC1Q96CN9 775 aa20.89■□□□□ 0.94
CDKN1A-201ENST00000244741 TM4SF1P30408 202 aa20.89■□□□□ 0.93
CDKN1A-201ENST00000244741 SLKQ9H2G2 1235 aaPredicted RBP20.89■□□□□ 0.93
CDKN1A-201ENST00000244741 APBB1O00213 710 aa20.88■□□□□ 0.93
CDKN1A-201ENST00000244741 KLHDC4Q8TBB5 520 aa20.88■□□□□ 0.93
CDKN1A-201ENST00000244741 MMP10P09238 476 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 NLGN1Q8N2Q7 840 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 RGL2O15211 777 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 SERPINB2P05120 415 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 TPTE2Q6XPS3 522 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 ANTXR1Q9H6X2 564 aa20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 PA2G4Q9UQ80 394 aaKnown RBP20.87■□□□□ 0.93
CDKN1A-201ENST00000244741 POLRMTO00411 1230 aaKnown RBP20.86■□□□□ 0.93
CDKN1A-201ENST00000244741 GSE1Q14687 1217 aa20.86■□□□□ 0.93
CDKN1A-201ENST00000244741 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
CDKN1A-201ENST00000244741 IBTKQ9P2D0 1353 aaPredicted RBP20.86■□□□□ 0.93
CDKN1A-201ENST00000244741 ZBTB7AO95365 584 aa20.86■□□□□ 0.93
CDKN1A-201ENST00000244741 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 HDAC5Q9UQL6 1122 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 EXOC6BQ9Y2D4 811 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 PRR5LQ6MZQ0 368 aa20.85■□□□□ 0.93
CDKN1A-201ENST00000244741 PDE8AO60658 829 aa20.84■□□□□ 0.93
CDKN1A-201ENST00000244741 CTSWP56202 376 aa20.84■□□□□ 0.93
CDKN1A-201ENST00000244741 SIL1Q9H173 461 aa20.84■□□□□ 0.93
CDKN1A-201ENST00000244741 RABL6Q3YEC7 729 aaPredicted RBP20.83■□□□□ 0.93
CDKN1A-201ENST00000244741 TTLL11Q8NHH1 800 aa20.83■□□□□ 0.93
CDKN1A-201ENST00000244741 SSH3Q8TE77 659 aa20.83■□□□□ 0.93
CDKN1A-201ENST00000244741 ZNF594Q96JF6 807 aaPredicted RBP20.83■□□□□ 0.93
CDKN1A-201ENST00000244741 GREM2Q9H772 168 aa20.83■□□□□ 0.93
CDKN1A-201ENST00000244741 HMMRO75330 724 aa20.83■□□□□ 0.92
CDKN1A-201ENST00000244741 BMP2KLQ5H9B9 411 aa20.83■□□□□ 0.92
CDKN1A-201ENST00000244741 COL24A1Q17RW2 1714 aa20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 POLA2Q14181 598 aa20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 MTX1Q13505 466 aa20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 PARP3Q9Y6F1 533 aa20.82■□□□□ 0.92
CDKN1A-201ENST00000244741 SURF6O75683 361 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-201ENST00000244741 QSER1Q2KHR3 1735 aa20.8■□□□□ 0.92
CDKN1A-201ENST00000244741 DDX60Q8IY21 1712 aaKnown RBP20.8■□□□□ 0.92
CDKN1A-201ENST00000244741 CSF1RP07333 972 aa20.8■□□□□ 0.92
CDKN1A-201ENST00000244741 SEC31BQ9NQW1 1179 aa20.8■□□□□ 0.92
CDKN1A-201ENST00000244741 ITGA6P23229 1130 aa20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 DCTPP1Q9H773 170 aa20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 RFX5P48382 616 aaPredicted RBP20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 CCDC57Q2TAC2 916 aa20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
CDKN1A-201ENST00000244741 ST5P78524 1137 aa20.78■□□□□ 0.92
CDKN1A-201ENST00000244741 PTPN12Q05209 780 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-201ENST00000244741 RBM25P49756 843 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-201ENST00000244741 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
CDKN1A-201ENST00000244741 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
CDKN1A-201ENST00000244741 MYH3P11055 1940 aa20.77■□□□□ 0.92
CDKN1A-201ENST00000244741 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
CDKN1A-201ENST00000244741 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
CDKN1A-201ENST00000244741 PUS3Q9BZE2 481 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-201ENST00000244741 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
CDKN1A-201ENST00000244741 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
CDKN1A-201ENST00000244741 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
CDKN1A-201ENST00000244741 TAF1P21675 1872 aa20.75■□□□□ 0.91
CDKN1A-201ENST00000244741 LRRC24Q50LG9 513 aa20.75■□□□□ 0.91
CDKN1A-201ENST00000244741 SLC16A10Q8TF71 515 aa20.75■□□□□ 0.91
CDKN1A-201ENST00000244741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.75■□□□□ 0.91
CDKN1A-201ENST00000244741 UTRNP46939 3433 aa20.74■□□□□ 0.91
CDKN1A-201ENST00000244741 ANKRD18BA2A2Z9 1011 aa20.74■□□□□ 0.91
CDKN1A-201ENST00000244741 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
CDKN1A-201ENST00000244741 IL1RAPL2Q9NP60 686 aa20.74■□□□□ 0.91
CDKN1A-201ENST00000244741 COL4A1P02462 1669 aa20.74■□□□□ 0.91
CDKN1A-201ENST00000244741 TBC1D9Q6ZT07 1266 aa20.73■□□□□ 0.91
CDKN1A-201ENST00000244741 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDKN1A-201ENST00000244741 SF3B3Q15393 1217 aaKnown RBP20.73■□□□□ 0.91
CDKN1A-201ENST00000244741 COPRSQ9NQ92 184 aa20.73■□□□□ 0.91
CDKN1A-201ENST00000244741 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 LAMB2P55268 1798 aa20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 CASZ1Q86V15 1759 aa20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 MTFR1LQ9H019 292 aa20.72■□□□□ 0.91
CDKN1A-201ENST00000244741 LDHAL6AQ6ZMR3 332 aa20.71■□□□□ 0.91
CDKN1A-201ENST00000244741 CELF1Q92879 486 aaKnown RBP20.71■□□□□ 0.91
CDKN1A-201ENST00000244741 SASH1O94885 1247 aa20.7■□□□□ 0.91
CDKN1A-201ENST00000244741 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.91
CDKN1A-201ENST00000244741 HSCBQ8IWL3 235 aa20.7■□□□□ 0.91
CDKN1A-201ENST00000244741 ATG9AQ7Z3C6 839 aa20.7■□□□□ 0.9
CDKN1A-201ENST00000244741 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
CDKN1A-201ENST00000244741 BRIP1Q9BX63 1249 aa20.7■□□□□ 0.9
CDKN1A-201ENST00000244741 LRRCC1Q9C099 1032 aa20.7■□□□□ 0.9
CDKN1A-201ENST00000244741 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 KIF2CQ99661 725 aa20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 CNNM1Q9NRU3 951 aa20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 PPP1R1BQ9UD71 204 aaPredicted RBP20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 TFCP2Q12800 502 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms