RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
VEGFA-201ENST00000230480 PDE8AO60658 829 aa17.52■□□□□ 0.4
VEGFA-201ENST00000230480 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-201ENST00000230480 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
VEGFA-201ENST00000230480 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
VEGFA-201ENST00000230480 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
VEGFA-201ENST00000230480 ATP6V0A2Q9Y487 856 aa17.52■□□□□ 0.4
VEGFA-201ENST00000230480 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.39
VEGFA-201ENST00000230480 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-201ENST00000230480 CSF1RP07333 972 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 LMNB1P20700 586 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 FOXO4P98177 505 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 GRAPQ13588 217 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 UBE3BQ7Z3V4 1068 aa17.51■□□□□ 0.39
VEGFA-201ENST00000230480 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-201ENST00000230480 BCAR3O75815 825 aa17.5■□□□□ 0.39
VEGFA-201ENST00000230480 BBOX1O75936 387 aa17.5■□□□□ 0.39
VEGFA-201ENST00000230480 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
VEGFA-201ENST00000230480 SP8Q8IXZ3 490 aa17.5■□□□□ 0.39
VEGFA-201ENST00000230480 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-201ENST00000230480 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
VEGFA-201ENST00000230480 WTIPA6NIX2 430 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-201ENST00000230480 POTECB2RU33 542 aa17.49■□□□□ 0.39
VEGFA-201ENST00000230480 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
VEGFA-201ENST00000230480 PSMD1Q99460 953 aa17.49■□□□□ 0.39
VEGFA-201ENST00000230480 ZNF277Q9NRM2 450 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-201ENST00000230480 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
VEGFA-201ENST00000230480 UTYO14607 1347 aa17.48■□□□□ 0.39
VEGFA-201ENST00000230480 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-201ENST00000230480 CTSWP56202 376 aa17.48■□□□□ 0.39
VEGFA-201ENST00000230480 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
VEGFA-201ENST00000230480 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-201ENST00000230480 GREM2Q9H772 168 aa17.48■□□□□ 0.39
VEGFA-201ENST00000230480 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
VEGFA-201ENST00000230480 PTPRCP08575 1304 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 KIF3CO14782 793 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 RPS8P62241 208 aaKnown RBP17.47■□□□□ 0.39
VEGFA-201ENST00000230480 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
VEGFA-201ENST00000230480 GRM8O00222 908 aa17.46■□□□□ 0.39
VEGFA-201ENST00000230480 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
VEGFA-201ENST00000230480 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
VEGFA-201ENST00000230480 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
VEGFA-201ENST00000230480 GPSM2P81274 684 aa17.45■□□□□ 0.38
VEGFA-201ENST00000230480 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-201ENST00000230480 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
VEGFA-201ENST00000230480 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
VEGFA-201ENST00000230480 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
VEGFA-201ENST00000230480 FZD9O00144 591 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 C1QTNF8P60827 252 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 FAM161AQ3B820 660 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
VEGFA-201ENST00000230480 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
VEGFA-201ENST00000230480 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
VEGFA-201ENST00000230480 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-201ENST00000230480 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
VEGFA-201ENST00000230480 ZC3H4Q9UPT8 1303 aaKnown RBP17.42■□□□□ 0.38
VEGFA-201ENST00000230480 WDR90Q96KV7 1748 aa17.41■□□□□ 0.38
VEGFA-201ENST00000230480 MPNDQ8N594 471 aa17.41■□□□□ 0.38
VEGFA-201ENST00000230480 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-201ENST00000230480 TRIM27P14373 513 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 ITGA6P23229 1130 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
VEGFA-201ENST00000230480 LMBR1LQ6UX01 489 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 TMC4Q7Z404 712 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
VEGFA-201ENST00000230480 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
VEGFA-201ENST00000230480 AOC3Q16853 763 aa17.39■□□□□ 0.37
VEGFA-201ENST00000230480 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
VEGFA-201ENST00000230480 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
VEGFA-201ENST00000230480 TBC1D16Q8TBP0 767 aa17.39■□□□□ 0.37
VEGFA-201ENST00000230480 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-201ENST00000230480 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-201ENST00000230480 IRS2Q9Y4H2 1338 aa17.39■□□□□ 0.37
VEGFA-201ENST00000230480 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
VEGFA-201ENST00000230480 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 ZNF594Q96JF6 807 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
VEGFA-201ENST00000230480 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
VEGFA-201ENST00000230480 RLBP1P12271 317 aa17.37■□□□□ 0.37
VEGFA-201ENST00000230480 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
VEGFA-201ENST00000230480 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
VEGFA-201ENST00000230480 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
VEGFA-201ENST00000230480 SNAP23O00161 211 aa17.36■□□□□ 0.37
VEGFA-201ENST00000230480 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
VEGFA-201ENST00000230480 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms