RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 UTYO14607 1347 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 F6X3S4 739 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 MYL6BP14649 208 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
CDCA3-201ENST00000229265 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 LAMB2P55268 1798 aa13.16□□□□□ -0.3
CDCA3-201ENST00000229265 SNED1Q8TER0 1413 aa13.15□□□□□ -0.3
CDCA3-201ENST00000229265 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
CDCA3-201ENST00000229265 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
CDCA3-201ENST00000229265 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
CDCA3-201ENST00000229265 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
CDCA3-201ENST00000229265 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
CDCA3-201ENST00000229265 POLA2Q14181 598 aa13.14□□□□□ -0.31
CDCA3-201ENST00000229265 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
CDCA3-201ENST00000229265 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CDCA3-201ENST00000229265 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
CDCA3-201ENST00000229265 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
CDCA3-201ENST00000229265 AOX1Q06278 1338 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 GPTP24298 496 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 CASC1Q6TDU7 716 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
CDCA3-201ENST00000229265 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
CDCA3-201ENST00000229265 A0A087WZG4 1122 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 C21orf2O43822 256 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 SRGNP10124 158 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 C7orf43Q8WVR3 580 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
CDCA3-201ENST00000229265 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
CDCA3-201ENST00000229265 POTECB2RU33 542 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 CDC45O75419 566 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDCA3-201ENST00000229265 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
CDCA3-201ENST00000229265 SEC24BO95487 1268 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
CDCA3-201ENST00000229265 HTRA3P83110 453 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■□□□□ 9.1
CDCA3-201ENST00000229265 KIF1BPQ96EK5 621 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-201ENST00000229265 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-201ENST00000229265 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
CDCA3-201ENST00000229265 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
CDCA3-201ENST00000229265 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-201ENST00000229265 NTSR2O95665 410 aa13.09□□□□□ -0.31
CDCA3-201ENST00000229265 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
CDCA3-201ENST00000229265 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
CDCA3-201ENST00000229265 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
CDCA3-201ENST00000229265 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
CDCA3-201ENST00000229265 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
CDCA3-201ENST00000229265 PDE1AP54750 535 aa13.08□□□□□ -0.32
CDCA3-201ENST00000229265 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
CDCA3-201ENST00000229265 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
CDCA3-201ENST00000229265 XAGE3Q8WTP9 111 aa13.08□□□□□ -0.32
CDCA3-201ENST00000229265 SNX21Q969T3 373 aa13.08□□□□□ -0.32
CDCA3-201ENST00000229265 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-201ENST00000229265 H0YIN7 160 aa13.07□□□□□ -0.32
CDCA3-201ENST00000229265 GRM8O00222 908 aa13.07□□□□□ -0.32
CDCA3-201ENST00000229265 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
CDCA3-201ENST00000229265 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
CDCA3-201ENST00000229265 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-201ENST00000229265 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
CDCA3-201ENST00000229265 LTBP1Q14766 1721 aa13.06□□□□□ -0.32
CDCA3-201ENST00000229265 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
CDCA3-201ENST00000229265 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-201ENST00000229265 AIMP1Q12904 312 aaKnown RBP13.06□□□□□ -0.32
CDCA3-201ENST00000229265 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
CDCA3-201ENST00000229265 SRGAP3O43295 1099 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 SURF6O75683 361 aaKnown RBP13.05□□□□□ -0.32
CDCA3-201ENST00000229265 REC8O95072 547 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
CDCA3-201ENST00000229265 GCKRQ14397 625 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-201ENST00000229265 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
CDCA3-201ENST00000229265 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
CDCA3-201ENST00000229265 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
CDCA3-201ENST00000229265 MX1P20591 662 aa13.04□□□□□ -0.32
CDCA3-201ENST00000229265 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
CDCA3-201ENST00000229265 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
CDCA3-201ENST00000229265 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
CDCA3-201ENST00000229265 C16orf71Q8IYS4 520 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-201ENST00000229265 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms