RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 PLCB2Q00722 1185 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
GABPB1-201ENST00000220429 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 BEND3Q5T5X7 828 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 DEF6Q9H4E7 631 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 ADCY9O60503 1353 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 COL18A1P39060 1754 aa16.07■□□□□ 0.16
GABPB1-201ENST00000220429 CASC1Q6TDU7 716 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 CCDC91Q7Z6B0 441 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 LMTK3Q96Q04 1460 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 GOLIM4O00461 696 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 GIGYF1O75420 1035 aaPredicted RBP16.06■□□□□ 0.16
GABPB1-201ENST00000220429 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 SRLQ86TD4 932 aa16.06■□□□□ 0.16
GABPB1-201ENST00000220429 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
GABPB1-201ENST00000220429 DCCP43146 1447 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 NBPF7P0C2Y1 421 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-201ENST00000220429 MX1P20591 662 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 TDO2P48775 406 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-201ENST00000220429 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-201ENST00000220429 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 MNS1Q8NEH6 495 aa16.05■□□□□ 0.16
GABPB1-201ENST00000220429 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-201ENST00000220429 IRF6O14896 467 aa16.04■□□□□ 0.16
GABPB1-201ENST00000220429 POLA2Q14181 598 aa16.04■□□□□ 0.16
GABPB1-201ENST00000220429 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
GABPB1-201ENST00000220429 MED4Q9NPJ6 270 aa16.04■□□□□ 0.16
GABPB1-201ENST00000220429 DNAJC21Q5F1R6 531 aaKnown RBP16.04■□□□□ 0.16
GABPB1-201ENST00000220429 ZNF215Q9UL58 517 aaPredicted RBP16.04■□□□□ 0.16
GABPB1-201ENST00000220429 RRP15Q9Y3B9 282 aaKnown RBP16.04■□□□□ 0.16
GABPB1-201ENST00000220429 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 RNF217Q8TC41 542 aa16.03■□□□□ 0.16
GABPB1-201ENST00000220429 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
GABPB1-201ENST00000220429 ERC2O15083 957 aa16.03■□□□□ 0.16
GABPB1-201ENST00000220429 ELF2Q15723 593 aa16.03■□□□□ 0.16
GABPB1-201ENST00000220429 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
GABPB1-201ENST00000220429 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
GABPB1-201ENST00000220429 PACS2Q86VP3 889 aa16.02■□□□□ 0.16
GABPB1-201ENST00000220429 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
GABPB1-201ENST00000220429 IL1RAPL2Q9NP60 686 aa16.02■□□□□ 0.16
GABPB1-201ENST00000220429 RAI14Q9P0K7 980 aa16.02■□□□□ 0.16
GABPB1-201ENST00000220429 FHOD1Q9Y613 1164 aa16.02■□□□□ 0.16
GABPB1-201ENST00000220429 SRGAP3O43295 1099 aa16.02■□□□□ 0.15
GABPB1-201ENST00000220429 TPM4P67936 248 aa16.02■□□□□ 0.15
GABPB1-201ENST00000220429 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.15
GABPB1-201ENST00000220429 GPS2Q13227 327 aa16.02■□□□□ 0.15
GABPB1-201ENST00000220429 RAPGEF4Q8WZA2 1011 aa16.02■□□□□ 0.15
GABPB1-201ENST00000220429 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-201ENST00000220429 MEGF6O75095 1541 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 SURF6O75683 361 aaKnown RBP16.01■□□□□ 0.15
GABPB1-201ENST00000220429 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 AP5Z1O43299 807 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 PTGS1P23219 599 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
GABPB1-201ENST00000220429 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 C5P01031 1676 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 PLA2G4AP47712 749 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 XIRP1Q702N8 1843 aaKnown RBP16■□□□□ 0.15
GABPB1-201ENST00000220429 RAB11FIP3O75154 756 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 E2F4Q16254 413 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 CEP135Q66GS9 1140 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 ZNF592Q92610 1267 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 SMARCE1Q969G3 411 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
GABPB1-201ENST00000220429 CCDC189A1A4V9 331 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 POLR3GO15318 223 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-201ENST00000220429 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 FBXO18Q8NFZ0 1043 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 PHKG2P15735 406 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-201ENST00000220429 MAGEA9P43362 315 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 HSPA2P54652 639 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 ST5P78524 1137 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 SLC39A6Q13433 755 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-201ENST00000220429 SWT1Q5T5J6 900 aaKnown RBP15.99■□□□□ 0.15
GABPB1-201ENST00000220429 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 RHPN1Q8TCX5 695 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 SGSM3Q96HU1 749 aa15.99■□□□□ 0.15
GABPB1-201ENST00000220429 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms