RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 BMP2KLQ5H9B9 411 aa21.79■■□□□ 1.08
SMPD3-201ENST00000219334 PANK2Q9BZ23 570 aa21.79■■□□□ 1.08
SMPD3-201ENST00000219334 ZBTB43O43298 467 aa21.79■■□□□ 1.08
SMPD3-201ENST00000219334 PRC1O43663 620 aa21.79■■□□□ 1.08
SMPD3-201ENST00000219334 GBP3Q9H0R5 595 aa21.79■■□□□ 1.08
SMPD3-201ENST00000219334 DISP3Q9P2K9 1392 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 PLCG2P16885 1265 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 CCDC91Q7Z6B0 441 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 A2MP01023 1474 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 KLF18A0A0U1RQI7 1052 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 RBM26Q5T8P6 1007 aaKnown RBP21.78■■□□□ 1.08
SMPD3-201ENST00000219334 PLCH2O75038 1416 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 LMTK3Q96Q04 1460 aa21.78■■□□□ 1.08
SMPD3-201ENST00000219334 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
SMPD3-201ENST00000219334 PUF60Q9UHX1 559 aaKnown RBP21.78■■□□□ 1.08
SMPD3-201ENST00000219334 KIF4BQ2VIQ3 1234 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 PAFAH1B1P43034 410 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 TSHZ3Q63HK5 1081 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 CPLX3Q8WVH0 158 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 TTC22Q5TAA0 569 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 STX6O43752 255 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 CCDC102BQ68D86 513 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 TBC1D9Q6ZT07 1266 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 CRACR2AQ9BSW2 395 aa21.77■■□□□ 1.08
SMPD3-201ENST00000219334 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.07
SMPD3-201ENST00000219334 BMP15O95972 392 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 USP37Q86T82 979 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 WWC3Q9ULE0 1092 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 EIF4A2Q14240 407 aaKnown RBP21.76■■□□□ 1.07
SMPD3-201ENST00000219334 DCAF5Q96JK2 942 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 SMARCC2Q8TAQ2 1214 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 BRF1Q92994 677 aa21.76■■□□□ 1.07
SMPD3-201ENST00000219334 RBM25P49756 843 aaKnown RBP21.75■■□□□ 1.07
SMPD3-201ENST00000219334 DNA2P51530 1060 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 PTPN14Q15678 1187 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 RTN1Q16799 776 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 MEIS3Q99687 375 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 ANKRD2Q9GZV1 360 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 FLT4P35916 1363 aa21.75■■□□□ 1.07
SMPD3-201ENST00000219334 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
SMPD3-201ENST00000219334 LMOD1P29536 600 aaPredicted RBP21.75■■□□□ 1.07
SMPD3-201ENST00000219334 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
SMPD3-201ENST00000219334 GCP02774 474 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 CA8P35219 290 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 MAP3K1Q13233 1512 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 MAGEB6P1A0A0J9YX57 407 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 HEATR3Q7Z4Q2 680 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 LINS1Q8NG48 757 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 FERMT1Q9BQL6 677 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 BIN1O00499 593 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 EXOC1Q9NV70 894 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 MCMDC2Q4G0Z9 681 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 DYDC1Q8WWB3 177 aa21.74■■□□□ 1.07
SMPD3-201ENST00000219334 TNNT1P13805 278 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 TRAPPC3LQ5T215 181 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 CCDC113Q9H0I3 377 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 ZNF518AQ6AHZ1 1483 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 PPFIA3O75145 1194 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 PLS1Q14651 629 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 CLIP2Q9UDT6 1046 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
SMPD3-201ENST00000219334 ZSCAN16Q9H4T2 348 aaPredicted RBP21.72■■□□□ 1.07
SMPD3-201ENST00000219334 RMND1Q9NWS8 449 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 COMMD10Q9Y6G5 202 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 GNAT2P19087 354 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 CASQ1P31415 396 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
SMPD3-201ENST00000219334 STK32BQ9NY57 414 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 PCDH11XQ9BZA7 1347 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 PCDH11YQ9BZA8 1340 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 NAPAP54920 295 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 ALS2CR12Q96Q35 445 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 C6orf50Q9HD87 102 aa21.72■■□□□ 1.07
SMPD3-201ENST00000219334 GPATCH8Q9UKJ3 1502 aaKnown RBP21.71■■□□□ 1.07
SMPD3-201ENST00000219334 TMCO5BA8MYB1 307 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 STX1AQ16623 288 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 BRPF3Q9ULD4 1205 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 RIMBP2O15034 1052 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 CCDC172P0C7W6 258 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
SMPD3-201ENST00000219334 GNPATO15228 680 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 MAP9Q49MG5 647 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 ALG1Q9BT22 464 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 TAOK3Q9H2K8 898 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 MAP3K9P80192 1104 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
SMPD3-201ENST00000219334 SSFA2P28290 1259 aa21.7■■□□□ 1.07
SMPD3-201ENST00000219334 TNNI2P48788 182 aa21.7■■□□□ 1.07
SMPD3-201ENST00000219334 TRIM47Q96LD4 638 aa21.7■■□□□ 1.06
SMPD3-201ENST00000219334 IFFO1Q0D2I5 559 aa21.7■■□□□ 1.06
SMPD3-201ENST00000219334 RBM27Q9P2N5 1060 aaKnown RBP21.7■■□□□ 1.06
SMPD3-201ENST00000219334 URI1O94763 535 aaPredicted RBP21.69■■□□□ 1.06
SMPD3-201ENST00000219334 MCM3P25205 808 aa21.69■■□□□ 1.06
SMPD3-201ENST00000219334 KIF18AQ8NI77 898 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms