RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CASZ1Q86V15 1759 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 CHGBP05060 677 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
USP11-201ENST00000218348 EAF2Q96CJ1 260 aaPredicted RBP12.08□□□□□ -0.48
USP11-201ENST00000218348 SASH1O94885 1247 aa12.07□□□□□ -0.48
USP11-201ENST00000218348 GCKRQ14397 625 aa12.07□□□□□ -0.48
USP11-201ENST00000218348 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
USP11-201ENST00000218348 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
USP11-201ENST00000218348 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
USP11-201ENST00000218348 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 KCNJ4P48050 445 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 CNTROBQ8N137 903 aa12.06□□□□□ -0.48
USP11-201ENST00000218348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP11-201ENST00000218348 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
USP11-201ENST00000218348 STAP2Q9UGK3 403 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 MCCP23508 829 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 LMBR1LQ6UX01 489 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
USP11-201ENST00000218348 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 NEUROD6Q96NK8 337 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
USP11-201ENST00000218348 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
USP11-201ENST00000218348 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 ITPK1Q13572 414 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 PRDM10Q9NQV6 1147 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 SLFNL1Q499Z3 407 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 HSP90AB4PQ58FF6 505 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 TFCP2Q12800 502 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
USP11-201ENST00000218348 NUP98P52948 1817 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 PLSCR1O15162 318 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 GPTP24298 496 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 PTH1RQ03431 593 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
USP11-201ENST00000218348 RAB3GAP1Q15042 981 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
USP11-201ENST00000218348 AMIGO3Q86WK7 504 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 GBP4Q96PP9 640 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 FSD1Q9BTV5 496 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
USP11-201ENST00000218348 NRXN2Q9P2S2 1712 aa12.02□□□□□ -0.48
USP11-201ENST00000218348 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
USP11-201ENST00000218348 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
USP11-201ENST00000218348 DDIT3P35638 169 aa12.02□□□□□ -0.49
USP11-201ENST00000218348 TRIM37O94972 964 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
USP11-201ENST00000218348 TIMM10P62072 90 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
USP11-201ENST00000218348 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 SGSM2O43147 1006 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 CNPY4Q8N129 248 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
USP11-201ENST00000218348 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 DBNDD2Q9BQY9 259 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
USP11-201ENST00000218348 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
USP11-201ENST00000218348 BAG4O95429 457 aaKnown RBP12□□□□□ -0.49
USP11-201ENST00000218348 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
USP11-201ENST00000218348 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
USP11-201ENST00000218348 FAM89AQ96GI7 184 aa12□□□□□ -0.49
USP11-201ENST00000218348 LAMB2P55268 1798 aa12□□□□□ -0.49
USP11-201ENST00000218348 PXDNLA1KZ92 1463 aa12□□□□□ -0.49
USP11-201ENST00000218348 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
USP11-201ENST00000218348 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
USP11-201ENST00000218348 SIK1P57059 783 aa12□□□□□ -0.49
USP11-201ENST00000218348 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
USP11-201ENST00000218348 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
USP11-201ENST00000218348 JAKMIP1Q96N16 626 aaKnown RBP11.99□□□□□ -0.49
USP11-201ENST00000218348 SEC62Q99442 399 aaKnown RBP11.99□□□□□ -0.49
USP11-201ENST00000218348 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 PTPN12Q05209 780 aaKnown RBP11.99□□□□□ -0.49
USP11-201ENST00000218348 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 SNX14Q9Y5W7 946 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 A0A0D9SFI3 127 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 MTX1Q13505 466 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
USP11-201ENST00000218348 PDCL3Q9H2J4 239 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 SNRKQ9NRH2 765 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms