RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 NEXNQ0ZGT2 675 aa18.41■□□□□ 0.54
RHOXF1-201ENST00000217999 MPNDQ8N594 471 aa18.41■□□□□ 0.54
RHOXF1-201ENST00000217999 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
RHOXF1-201ENST00000217999 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 AOC3Q16853 763 aa18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 TSPYL6Q8N831 410 aa18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
RHOXF1-201ENST00000217999 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 COL4A5P29400 1685 aa18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 EPHX2P34913 555 aa18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 EAPPQ56P03 285 aaPredicted RBP18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 GJA3Q9Y6H8 435 aa18.39■□□□□ 0.53
RHOXF1-201ENST00000217999 KSR2Q6VAB6 950 aa18.38■□□□□ 0.53
RHOXF1-201ENST00000217999 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
RHOXF1-201ENST00000217999 KLRG1Q96E93 195 aa18.38■□□□□ 0.53
RHOXF1-201ENST00000217999 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
RHOXF1-201ENST00000217999 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
RHOXF1-201ENST00000217999 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
RHOXF1-201ENST00000217999 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
RHOXF1-201ENST00000217999 TAF1P21675 1872 aa18.37■□□□□ 0.53
RHOXF1-201ENST00000217999 PI4KAP2A4QPH2 592 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 PDE8AO60658 829 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 KIAA2012Q0VF49 1180 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 PI4KAP1Q8N8J0 262 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 DUOX1Q9NRD9 1551 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 ZNRF3Q9ULT6 936 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 CLEC11AQ9Y240 323 aa18.36■□□□□ 0.53
RHOXF1-201ENST00000217999 MYH3P11055 1940 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 CDHR2Q9BYE9 1310 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 HTRA3P83110 453 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 SLC51AQ86UW1 340 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 DNAJC5GQ8N7S2 189 aa18.35■□□□□ 0.53
RHOXF1-201ENST00000217999 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
RHOXF1-201ENST00000217999 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
RHOXF1-201ENST00000217999 EYA3Q99504 573 aa18.34■□□□□ 0.53
RHOXF1-201ENST00000217999 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
RHOXF1-201ENST00000217999 FLIIQ13045 1269 aa18.33■□□□□ 0.52
RHOXF1-201ENST00000217999 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.52
RHOXF1-201ENST00000217999 TNIP1Q15025 636 aa18.33■□□□□ 0.52
RHOXF1-201ENST00000217999 CREBZFQ9NS37 354 aa18.33■□□□□ 0.52
RHOXF1-201ENST00000217999 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
RHOXF1-201ENST00000217999 CIAPIN1Q6FI81 312 aa18.32■□□□□ 0.52
RHOXF1-201ENST00000217999 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
RHOXF1-201ENST00000217999 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
RHOXF1-201ENST00000217999 LTBP1Q14766 1721 aa18.32■□□□□ 0.52
RHOXF1-201ENST00000217999 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
RHOXF1-201ENST00000217999 SCNN1DP51172 638 aa18.31■□□□□ 0.52
RHOXF1-201ENST00000217999 CTSWP56202 376 aa18.31■□□□□ 0.52
RHOXF1-201ENST00000217999 NEURL1BA8MQ27 555 aa18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 EXOSC9Q06265 439 aaKnown RBP18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 USP50Q70EL3 339 aaPredicted RBP18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
RHOXF1-201ENST00000217999 PASKQ96RG2 1323 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 IGKV5-2P06315 115 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 GPSM2P81274 684 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 CXCL9Q07325 125 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 GPRC5DQ9NZD1 345 aa18.29■□□□□ 0.52
RHOXF1-201ENST00000217999 COL4A1P02462 1669 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 G3V3G9 751 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 VAMP4O75379 141 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 EPS15P42566 896 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 G2E3Q7L622 706 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 SEC31BQ9NQW1 1179 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 RTL9Q8NET4 1388 aa18.28■□□□□ 0.52
RHOXF1-201ENST00000217999 TMEM88BA6NKF7 163 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 RAD17O75943 681 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 UFL1O94874 794 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 GMPSP49915 693 aaPredicted RBP18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 MAP1SQ66K74 1059 aaPredicted RBP18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 LINS1Q8NG48 757 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 JARID2Q92833 1246 aaPredicted RBP18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 SPEF2Q9C093 1822 aa18.27■□□□□ 0.52
RHOXF1-201ENST00000217999 XDHP47989 1333 aa18.26■□□□□ 0.51
RHOXF1-201ENST00000217999 TBC1D16Q8TBP0 767 aa18.26■□□□□ 0.51
RHOXF1-201ENST00000217999 ZC3H12CQ9C0D7 883 aaKnown RBP18.26■□□□□ 0.51
RHOXF1-201ENST00000217999 RIMBP2O15034 1052 aa18.25■□□□□ 0.51
RHOXF1-201ENST00000217999 ECE2O60344 883 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms