RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 GRNP28799 593 aaKnown RBP6.34□□□□□ -1.39
CDKN3-201ENST00000216414 DPYDQ12882 1025 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 CRTC2Q53ET0 693 aaPredicted RBP6.34□□□□□ -1.39
CDKN3-201ENST00000216414 PERM1Q5SV97 790 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 DHX32Q7L7V1 743 aaKnown RBP6.34□□□□□ -1.39
CDKN3-201ENST00000216414 FBXO11Q86XK2 927 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 WFDC8Q8IUA0 241 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 WFDC12Q8WWY7 111 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
CDKN3-201ENST00000216414 FRRS1LQ9P0K9 344 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 ZFATQ9P243 1243 aa6.34□□□□□ -1.39
CDKN3-201ENST00000216414 RARAP10276 462 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 INPP5BP32019 993 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 IRAK1P51617 712 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 ARSDP51689 593 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 PLAURQ03405 335 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 DGKZQ13574 1117 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 GRIK5Q16478 980 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 HFE2Q6ZVN8 426 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 DTWD1Q8N5C7 304 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 FMNL2Q96PY5 1086 aa6.33□□□□□ -1.4
CDKN3-201ENST00000216414 ZBTB42B2RXF5 422 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L15C9J2P7 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L13C9JLJ4 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L11C9JVI0 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L21D6R901 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 SASH3O75995 380 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 MAP3K6O95382 1288 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 PRKCSHP14314 528 aaPredicted RBP6.32□□□□□ -1.4
CDKN3-201ENST00000216414 NOS3P29474 1203 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 PTK7Q13308 1070 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 ILDR2Q71H61 639 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 SLC51AQ86UW1 340 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 VTI1AQ96AJ9 217 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 IFT43Q96FT9 208 aa6.32□□□□□ -1.4
CDKN3-201ENST00000216414 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
CDKN3-201ENST00000216414 GPLD1P80108 840 aa6.31□□□□□ -1.4
CDKN3-201ENST00000216414 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
CDKN3-201ENST00000216414 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
CDKN3-201ENST00000216414 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
CDKN3-201ENST00000216414 MICAL2O94851 1124 aa6.3□□□□□ -1.4
CDKN3-201ENST00000216414 EIF2AK2P19525 551 aaKnown RBP6.3□□□□□ -1.4
CDKN3-201ENST00000216414 ARID4AP29374 1257 aaPredicted RBP6.3□□□□□ -1.4
CDKN3-201ENST00000216414 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
CDKN3-201ENST00000216414 MEGF10Q96KG7 1140 aa6.3□□□□□ -1.4
CDKN3-201ENST00000216414 CALR3Q96L12 384 aaKnown RBP6.3□□□□□ -1.4
CDKN3-201ENST00000216414 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
CDKN3-201ENST00000216414 QTRT2Q9H974 415 aaKnown RBP6.3□□□□□ -1.4
CDKN3-201ENST00000216414 USP20Q9Y2K6 914 aa6.3□□□□□ -1.4
CDKN3-201ENST00000216414 SSTR4P31391 388 aa6.29□□□□□ -1.4
CDKN3-201ENST00000216414 C11orf91Q3C1V1 193 aa6.29□□□□□ -1.4
CDKN3-201ENST00000216414 VRTNQ9H8Y1 702 aa6.29□□□□□ -1.4
CDKN3-201ENST00000216414 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
CDKN3-201ENST00000216414 FOXO3O43524 673 aa6.28□□□□□ -1.4
CDKN3-201ENST00000216414 DEAF1O75398 565 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-201ENST00000216414 LMOD1P29536 600 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-201ENST00000216414 FZD5Q13467 585 aa6.28□□□□□ -1.4
CDKN3-201ENST00000216414 KANK4Q5T7N3 995 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-201ENST00000216414 PRR23CQ6ZRP0 262 aa6.28□□□□□ -1.4
CDKN3-201ENST00000216414 CMTR1Q8N1G2 835 aaKnown RBP6.28□□□□□ -1.4
CDKN3-201ENST00000216414 FNBP4Q8N3X1 1017 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-201ENST00000216414 TTC9Q92623 222 aa6.28□□□□□ -1.4
CDKN3-201ENST00000216414 NRLP54845 237 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 GDF6Q6KF10 455 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-201ENST00000216414 RGL4Q8IZJ4 473 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 PLD4Q96BZ4 506 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 AKTIPQ9H8T0 292 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 RTCBQ9Y3I0 505 aaKnown RBP6.27□□□□□ -1.41
CDKN3-201ENST00000216414 RNF114Q9Y508 228 aa6.27□□□□□ -1.41
CDKN3-201ENST00000216414 J3QW42 95 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 XYLBO75191 536 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 ALX3O95076 343 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 GHRHP01286 108 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 PSAPP07602 524 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 TAL1P17542 331 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-201ENST00000216414 WEE1P30291 646 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 MYO19Q96H55 970 aa6.26□□□□□ -1.41
CDKN3-201ENST00000216414 NSUN5Q96P11 429 aaKnown RBP6.26□□□□□ -1.41
CDKN3-201ENST00000216414 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
CDKN3-201ENST00000216414 LOC102724428A0A0B4J2F2 783 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 DLL1O00548 723 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 OPLAHO14841 1288 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 PTCD1O75127 700 aaKnown RBP6.25□□□□□ -1.41
CDKN3-201ENST00000216414 FSTP19883 344 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 SIK1P57059 783 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 ARXQ96QS3 562 aa6.25□□□□□ -1.41
CDKN3-201ENST00000216414 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms