RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ECM2O94769 699 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 MBD3O95983 291 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 EAPPQ56P03 285 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 ACBD5Q5T8D3 534 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 PRKRIP1Q9H875 184 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 KIF21AQ7Z4S6 1674 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 GOLGA6CA6NDK9 693 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 GOLGA6BA6NDN3 693 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SPDYE16A6NNV3 312 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 GOLGA6DP0CG33 693 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 CCT4P50991 539 aaKnown RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 SPDYE2Q495Y8 402 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SMARCC1Q92922 1105 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 PPP2R3CQ969Q6 453 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 NUP62CLQ9H1M0 184 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 GOLGA6AQ9NYA3 693 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 PYGLP06737 847 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 SCAPERQ9BY12 1400 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 N4BP2L2Q92802 583 aaPredicted RBP3.92□□□□□ -1.78
NEB-201ENST00000172853 C6orf50Q9HD87 102 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 FAM184BQ9ULE4 1060 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 WIZO95785 1651 aa3.92□□□□□ -1.78
NEB-201ENST00000172853 BTBD11A6QL63 1104 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 CTAGE5O15320 804 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 PROCA1Q8NCQ7 364 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 CDC45O75419 566 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 HINFPQ9BQA5 517 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 ZC3H12CQ9C0D7 883 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 FEZ2Q9UHY8 353 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 CYP46A1Q9Y6A2 500 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 CEP128Q6ZU80 1094 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 KIFC2Q96AC6 838 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 CCDC144AA2RUR9 1427 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 TNNT1P13805 278 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 KIAA0753Q2KHM9 967 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 ARHGAP29Q52LW3 1261 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 RUNDC1Q96C34 613 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 STIM2Q9P246 746 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 CKAP4Q07065 602 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 SRPK1Q96SB4 655 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 RANBP6O60518 1105 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 TRMT1LQ7Z2T5 733 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 AACSQ86V21 672 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 TMC2Q8TDI7 906 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 E4F1Q66K89 784 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 IFT74Q96LB3 600 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 KCNG1Q9UIX4 513 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEB-201ENST00000172853 SOGA1O94964 1423 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 GOLGA8AA7E2F4 631 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 GOLGA8BA8MQT2 603 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 KIF3CO14782 793 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 KRT33BQ14525 404 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 ANO6Q4KMQ2 910 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 U3KPZ7 1027 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 DNM2P50570 870 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 GSTA5Q7RTV2 222 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 RASAL2Q9UJF2 1139 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 NSRP1Q9H0G5 558 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 BAZ1AQ9NRL2 1556 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 LRFN2Q9ULH4 789 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 PRKCQQ04759 706 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 VAT1LQ9HCJ6 419 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 E7EVH7 732 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 MTERF4Q7Z6M4 381 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 IFT81Q8WYA0 676 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 JPH4Q96JJ6 628 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 H7C1D1 291 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 PRPF4BQ13523 1007 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 TRMT112Q9UI30 125 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 BPIFB4P59827 614 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 IFIT5Q13325 482 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 RASA3Q14644 834 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 TBCCQ15814 346 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 TDRD12Q587J7 1177 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 PALM2Q8IXS6 379 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 GANCQ8TET4 914 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 MPHOSPH9Q99550 1183 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 USH1CQ9Y6N9 552 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 BACH1O14867 736 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 PPFIA2O75334 1257 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 SSRP1Q08945 709 aaKnown RBP3.91□□□□□ -1.78
NEB-201ENST00000172853 SH2D4BQ5SQS7 431 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 ZBED2Q9BTP6 218 aa3.91□□□□□ -1.78
NEB-201ENST00000172853 BLOC1S2Q6QNY1 142 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 SPECC1L-ADORA2AF8WAN1 911 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 YEATS4O95619 227 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 CEBPZQ03701 1054 aaKnown RBP3.9□□□□□ -1.78
NEB-201ENST00000172853 HSPA5P11021 654 aaKnown RBP3.9□□□□□ -1.78
NEB-201ENST00000172853 INPP1P49441 399 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 BBS5Q8N3I7 341 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 PPME1Q9Y570 386 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 SPDYE3A6NKU9 549 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 ZNF213O14771 459 aa3.9□□□□□ -1.78
NEB-201ENST00000172853 HEXIM1O94992 359 aaKnown RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms