RNA–Protein interactions for RNA: ENST00000023897.10

GABRA1-201, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 2,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-201ENST00000023897 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
GABRA1-201ENST00000023897 FPGT-TNNI3KV9GXZ4 949 aa17.49■□□□□ 0.39
GABRA1-201ENST00000023897 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
GABRA1-201ENST00000023897 KRT32Q14532 448 aa17.48■□□□□ 0.39
GABRA1-201ENST00000023897 SPEF2Q9C093 1822 aa17.48■□□□□ 0.39
GABRA1-201ENST00000023897 CYP27B1O15528 508 aa17.48■□□□□ 0.39
GABRA1-201ENST00000023897 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
GABRA1-201ENST00000023897 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
GABRA1-201ENST00000023897 CPDO75976 1380 aa17.47■□□□□ 0.39
GABRA1-201ENST00000023897 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
GABRA1-201ENST00000023897 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
GABRA1-201ENST00000023897 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
GABRA1-201ENST00000023897 DBNLQ9UJU6 430 aaKnown RBP17.47■□□□□ 0.39
GABRA1-201ENST00000023897 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
GABRA1-201ENST00000023897 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
GABRA1-201ENST00000023897 TAF5LO75529 589 aa17.46■□□□□ 0.39
GABRA1-201ENST00000023897 TFCP2Q12800 502 aa17.46■□□□□ 0.39
GABRA1-201ENST00000023897 LARP1BQ659C4 914 aaKnown RBP17.46■□□□□ 0.39
GABRA1-201ENST00000023897 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
GABRA1-201ENST00000023897 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
GABRA1-201ENST00000023897 CABP4P57796 275 aa17.45■□□□□ 0.38
GABRA1-201ENST00000023897 ELP1O95163 1332 aa17.45■□□□□ 0.38
GABRA1-201ENST00000023897 A0A087WZG4 1122 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 ZNF609O15014 1411 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
GABRA1-201ENST00000023897 CASP7P55210 303 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 KRT85P78386 507 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 TOB2Q14106 344 aaPredicted RBP17.44■□□□□ 0.38
GABRA1-201ENST00000023897 HAUS7Q99871 368 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
GABRA1-201ENST00000023897 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
GABRA1-201ENST00000023897 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
GABRA1-201ENST00000023897 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
GABRA1-201ENST00000023897 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
GABRA1-201ENST00000023897 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
GABRA1-201ENST00000023897 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
GABRA1-201ENST00000023897 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
GABRA1-201ENST00000023897 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
GABRA1-201ENST00000023897 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
GABRA1-201ENST00000023897 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
GABRA1-201ENST00000023897 SPATA31A3Q5VYP0 1347 aa17.42■□□□□ 0.38
GABRA1-201ENST00000023897 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
GABRA1-201ENST00000023897 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
GABRA1-201ENST00000023897 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
GABRA1-201ENST00000023897 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 TAF6LQ9Y6J9 622 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 H7C1W4 665 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 PTCD1O75127 700 aaKnown RBP17.41■□□□□ 0.38
GABRA1-201ENST00000023897 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
GABRA1-201ENST00000023897 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 RRP9O43818 475 aaKnown RBP17.4■□□□□ 0.38
GABRA1-201ENST00000023897 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
GABRA1-201ENST00000023897 TTC6Q86TZ1 520 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 TCEANC2Q96MN5 208 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
GABRA1-201ENST00000023897 GPR108Q9NPR9 543 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 LMBR1LQ6UX01 489 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 GTF3C6Q969F1 213 aa17.4■□□□□ 0.38
GABRA1-201ENST00000023897 SCAND2PQ9GZW5 306 aaPredicted RBP17.4■□□□□ 0.38
GABRA1-201ENST00000023897 MYH7P12883 1935 aa17.39■□□□□ 0.37
GABRA1-201ENST00000023897 FOXO4P98177 505 aa17.39■□□□□ 0.37
GABRA1-201ENST00000023897 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
GABRA1-201ENST00000023897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
GABRA1-201ENST00000023897 KDM4AO75164 1064 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 ADCY5O95622 1261 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 GIMAP6Q6P9H5 292 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
GABRA1-201ENST00000023897 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
GABRA1-201ENST00000023897 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
GABRA1-201ENST00000023897 DTNBO60941 627 aa17.37■□□□□ 0.37
GABRA1-201ENST00000023897 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
GABRA1-201ENST00000023897 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
GABRA1-201ENST00000023897 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 CYP21A2P08686 494 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
GABRA1-201ENST00000023897 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
GABRA1-201ENST00000023897 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 NUP62CLQ9H1M0 184 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
GABRA1-201ENST00000023897 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 STK3Q13188 491 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 Q6ZUG5 572 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
GABRA1-201ENST00000023897 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
GABRA1-201ENST00000023897 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms