RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CABP4P57796 275 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 KRT32Q14532 448 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 ZNF396Q96N95 335 aaPredicted RBP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 V9GYY5 206 aaPredicted RBP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 CAMK4Q16566 473 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 CCDC183Q5T5S1 534 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 RHPN1Q8TCX5 695 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 ECHDC1Q9NTX5 307 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 HOOK1Q9UJC3 728 aaKnown RBP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 DHX16O60231 1041 aaKnown RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 TRMT1Q9NXH9 659 aaKnown RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 MAP3K11Q16584 847 aa14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 SLIT3O75094 1523 aa14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 ERICH2A1L162 156 aa14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
TSPAN9-201ENST00000011898 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 CFAP45Q9UL16 551 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 STX6O43752 255 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 IPO7O95373 1038 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 AMOTQ4VCS5 1084 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 ATP2B1P20020 1258 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 FEZ1Q99689 392 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 OGFRQ9NZT2 677 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 RRP12Q5JTH9 1297 aaKnown RBP14.17□□□□□ -0.14
TSPAN9-201ENST00000011898 DMTNQ08495 405 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 CPDO75976 1380 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 ERLIN1O75477 346 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 TERF1P54274 439 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 CLGNO14967 610 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 HS1BP3Q53T59 392 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 CEP126Q9P2H0 1117 aa14.16□□□□□ -0.14
TSPAN9-201ENST00000011898 JCADQ9P266 1359 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 FAM193AP78312 1265 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 TXLNBQ8N3L3 684 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
TSPAN9-201ENST00000011898 URI1O94763 535 aaPredicted RBP14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 ANAPC15P60006 121 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 NOL7Q9UMY1 257 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 MAP3K2Q9Y2U5 619 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 AHDC1Q5TGY3 1603 aaPredicted RBP14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 ERBB3P21860 1342 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 NFAT5O94916 1531 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 TFIP11Q9UBB9 837 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 TTC39AQ5SRH9 613 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 NBPF6Q5VWK0 638 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 NBPF4Q96M43 638 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 GJB2P29033 226 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 EVI5LQ96CN4 794 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 MYD88Q99836 296 aa14.14□□□□□ -0.15
TSPAN9-201ENST00000011898 PHLPP1O60346 1717 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 NHSL1Q5SYE7 1610 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 G2E3Q7L622 706 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 BANK1Q8NDB2 785 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 CCP110O43303 1012 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 HCLS1P14317 486 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 CCDC85AQ96PX6 553 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
TSPAN9-201ENST00000011898 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 HYPKQ9NX55 129 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 RSPH14Q9UHP6 348 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 MED1Q15648 1581 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 TTC31Q49AM3 519 aaPredicted RBP14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 DRC1Q96MC2 740 aa14.12□□□□□ -0.15
TSPAN9-201ENST00000011898 UBE2HP62256 183 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 CHL1O00533 1208 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 WDR17Q8IZU2 1322 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 MYRIPQ8NFW9 859 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 684.4 ms