RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cnnm1Q0GA42 951 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Polr3gQ6NXY9 223 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Iffo2Q8R2V2 512 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Phkg2Q9DB30 406 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Irx4Q9QY61 515 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Topaz1E5FYH1 1653 aa15.27■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ttll7A4Q9F0 912 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ubash3aQ3V3E1 624 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Kank4Q6P9J5 1016 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 ThemisQ8BGW0 636 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ano1Q8BHY3 960 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Bicd2Q921C5 820 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Tns2Q8CGB6 1400 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Neurod6P48986 337 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 CebpzP53569 1052 aaKnown RBP15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Rbm42Q91V81 474 aaKnown RBP15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Sh3bgrQ9WUZ7 214 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ubn2Q80WC1 1314 aa15.26■□□□□ 0.03
Nup88-203ENSMUST00000108531 Irgm2A0A140LIF8 407 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 MypnQ5DTJ9 1315 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 Lnx1O70263 728 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 Hspa2P17156 633 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 RdxP26043 583 aaKnown RBP15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 Jarid2Q62315 1234 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 Prkab2Q6PAM0 271 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 OptnQ8K3K8 584 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 Adam1bQ8R534 806 aa15.25■□□□□ 0.03
Nup88-203ENSMUST00000108531 1700113H08RikE9Q9Q5 327 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Csrnp1P59054 583 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ripor2Q80U16 1078 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Q8C5K5 320 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Lrrfip2Q91WK0 415 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ccdc94Q9D6J3 314 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Cfap58B2RW38 873 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 TrdnE9Q9K5 693 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 Serpina10Q8R121 448 aa15.24■□□□□ 0.03
Nup88-203ENSMUST00000108531 NmiO35309 314 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Tpd52l1O54818 204 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Trim30aP15533 496 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Vps54Q5SPW0 977 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Dhx38Q80X98 1228 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Zfp317Q8C0Q5 607 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Dis3l2Q8CI75 870 aaKnown RBP15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Gys2Q8VCB3 704 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ubr2Q6WKZ8 1755 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Tnks1bp1P58871 1720 aa15.23■□□□□ 0.03
Nup88-203ENSMUST00000108531 Cdkn1cP49919 348 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Limch1Q3UH68 1057 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Usp44Q8C2S0 711 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Aox4Q3TYQ9 1336 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 CrklP47941 303 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Gnat3Q3V3I2 354 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ddx46Q569Z5 1032 aaKnown RBP15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Usp28Q5I043 1051 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Soga3Q6NZL0 945 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Smarcc2Q6PDG5 1213 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ddx58Q6Q899 926 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Mtmr3Q8K296 1196 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Osbpl5Q9ER64 874 aa15.22■□□□□ 0.03
Nup88-203ENSMUST00000108531 Oas2E9Q9A9 742 aa15.21■□□□□ 0.03
Nup88-203ENSMUST00000108531 Mb21d2Q8C525 428 aa15.21■□□□□ 0.03
Nup88-203ENSMUST00000108531 Rassf8Q8CJ96 419 aa15.21■□□□□ 0.03
Nup88-203ENSMUST00000108531 Erc1Q99MI1 1120 aa15.21■□□□□ 0.03
Nup88-203ENSMUST00000108531 Zeb2Q9R0G7 1215 aa15.21■□□□□ 0.03
Nup88-203ENSMUST00000108531 Ppp4r3aQ6P2K6 820 aa15.21■□□□□ 0.02
Nup88-203ENSMUST00000108531 Slc39a6Q8C145 765 aa15.21■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ccdc158Q8CDI6 1109 aa15.21■□□□□ 0.02
Nup88-203ENSMUST00000108531 MyclP10166 368 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Cdk4P30285 303 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Nlrp1aQ2LKU9 1182 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Fkbp5Q64378 456 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ankle2Q6P1H6 964 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ptcd1Q8C2E4 695 aaKnown RBP15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 PigbQ9JJQ0 542 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 AppP12023 770 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Gpatch11Q3UFS4 262 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Zranb3Q6NZP1 1069 aa15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Mrpl44Q9CY73 333 aaKnown RBP15.2■□□□□ 0.02
Nup88-203ENSMUST00000108531 Kansl3A2RSY1 903 aaKnown RBP15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Tmem109Q3UBX0 243 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Zfp251Q6PCX8 632 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Asic4Q7TNS7 539 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ubxn4Q8VCH8 506 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Nrbp1Q99J45 535 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Sh3bp5Q9Z131 463 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 AtrnQ9WU60 1428 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Prl7a2O54831 253 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Clec11aO88200 328 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Sass6Q80UK7 654 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Tsen34Q8BMZ5 316 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 LratQ9JI60 231 aa15.19■□□□□ 0.02
Nup88-203ENSMUST00000108531 Gm21698A0A087WQP8 267 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Gm21671G3UY31 267 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ano6Q6P9J9 911 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 BrapQ99MP8 591 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ifi35Q9D8C4 286 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Sult6b1P0CC03 303 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 FosbP13346 338 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 NpeppsQ11011 920 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Nxf2Q4ZGD8 691 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 6.4 ms