RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 BHLHE22Q8NFJ8 381 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-231ENST00000641939 STEAP2Q8NFT2 490 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
PHGDH-231ENST00000641939 RPS6KB2Q9UBS0 482 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 PRSS50Q9UI38 385 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 DSCAMO60469 2012 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 CADP27708 2225 aa13.33□□□□□ -0.28
PHGDH-231ENST00000641939 A0A1W2PPR1 153 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 LIPT2A6NK58 231 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 BBIP1A8MTZ0 92 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 TMEM229AB2RXF0 380 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 TPST1O60507 370 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 RAMP1O60894 148 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 CNOT4O95628 575 aaKnown RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 IL32P24001 234 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 EDNRAP25101 427 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ART1P52961 327 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 PCBP3P57721 371 aaKnown RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ITGADQ13349 1161 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 CEACAM7Q14002 265 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 CYLC2Q14093 348 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 MAPRE2Q15555 327 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 OR7A5Q15622 319 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 COQ5Q5HYK3 327 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 NET1Q7Z628 596 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ATG4DQ86TL0 474 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 COMTD1Q86VU5 262 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 SLC30A8Q8IWU4 369 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 STK35Q8TDR2 534 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 KISS1RQ969F8 398 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ZNF317Q96PQ6 595 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 SLC13A4Q9UKG4 626 aa13.32□□□□□ -0.28
PHGDH-231ENST00000641939 NOSIPQ9Y314 301 aaKnown RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 ZNF469Q96JG9 3925 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-231ENST00000641939 NPIPB7O75200 414 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 MFN2O95140 757 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 NPPAP01160 153 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 RAF1P04049 648 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 ADSLP30566 484 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-231ENST00000641939 DMTNQ08495 405 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 TSC22D1Q15714 1073 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 C1orf140Q5VVS0 124 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 REP15Q6BDI9 236 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 NANOGP8Q6NSW7 305 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.31□□□□□ -0.28
PHGDH-231ENST00000641939 LSMEM1Q8N8F7 131 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 OR10A6Q8NH74 314 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 C10orf82Q8WW14 230 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 APH1AQ96BI3 265 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 LRRC58Q96CX6 371 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 TAPBPLQ9BX59 468 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 TRIM2Q9C040 744 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 EVA1AQ9H8M9 152 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 NANOGQ9H9S0 305 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 C12orf10Q9HB07 376 aa13.31□□□□□ -0.28
PHGDH-231ENST00000641939 TESQ9UGI8 421 aaKnown RBP13.31□□□□□ -0.28
PHGDH-231ENST00000641939 RAI1Q7Z5J4 1906 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-231ENST00000641939 A0A1B0GWA3 101 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 ELOA3DA6NLF2 546 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 MRASO14807 208 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SLC22A2O15244 555 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 KLF4O43474 513 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 MRPL33O75394 65 aaKnown RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 AKR7A3O95154 331 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 HTR2AP28223 471 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 LOXP28300 417 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 NTF4P34130 210 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 PCGF2P35227 344 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 RGS8P57771 180 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 NCALDP61601 193 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 KEAP1Q14145 624 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SLC17A1Q14916 467 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 ELOA3BQ3SY89 546 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 BEX5Q5H9J7 111 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 OTUD3Q5T2D3 398 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SPNS3Q6ZMD2 512 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 BHLHA15Q7RTS1 189 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 WFDC8Q8IUA0 241 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SMYD1Q8NB12 490 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 OR52E4Q8NGH9 312 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 DNAJA4Q8WW22 397 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 FOXC2Q99958 501 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 SH3GL1Q99961 368 aa13.3□□□□□ -0.28
PHGDH-231ENST00000641939 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
PHGDH-231ENST00000641939 ADPRHL2Q9NX46 363 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms