RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KCNJ16Q9NPI9 418 aa8.48□□□□□ -1.05
PHGDH-228ENST00000641847 RPH3AQ9Y2J0 694 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF835Q9Y2P0 537 aa8.48□□□□□ -1.05
PHGDH-228ENST00000641847 LYVE1Q9Y5Y7 322 aa8.48□□□□□ -1.05
PHGDH-228ENST00000641847 CACNA1CQ13936 2221 aa8.48□□□□□ -1.05
PHGDH-228ENST00000641847 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ELOA3DA6NLF2 546 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ACOT7O00154 380 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ETV2O00321 342 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 CBR3O75828 277 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 CCNB2O95067 398 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 NTN1O95631 604 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 RFPL3SP0C7P2 107 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 PNMTP11086 282 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF23P17027 643 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 PTNP21246 168 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 FPR1P21462 350 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 TACR3P29371 465 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 SRD5A2P31213 254 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 HTR3AP46098 478 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 LIMS1P48059 325 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 POLR2HP52434 150 aaKnown RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 DLX5P56178 289 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 MERTKQ12866 999 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 GK3PQ14409 553 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 LAPTM4AQ15012 233 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 SEC23BQ15437 767 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ELOA3BQ3SY89 546 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 RAET1LQ5VY80 246 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 PODNL1Q6PEZ8 512 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 SHQ1Q6PI26 577 aaKnown RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 POMZP3Q6PJE2 187 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 WDR88Q6ZMY6 472 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 CXXC5Q7LFL8 322 aaKnown RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 EPHX4Q8IUS5 362 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 NKAIN4Q8IVV8 208 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 TMEM251Q8N6I4 163 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ZFP62Q8NB50 900 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ELOA3Q8NG57 546 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 OR5M1Q8NGP8 315 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 OR5K1Q8NHB7 308 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 POC1BQ8TC44 478 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 DNAJA4Q8WW22 397 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-228ENST00000641847 SLC38A4Q969I6 547 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ZBTB8AQ96BR9 441 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 MRGPRX4Q96LA9 322 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 GPR137Q96N19 417 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 NPAS1Q99742 590 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 PRSS27Q9BQR3 290 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 OR2B2Q9GZK3 357 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 UBQLN3Q9H347 655 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 C12orf10Q9HB07 376 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 DLL4Q9NR61 685 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 TMCC3Q9ULS5 477 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 OAZ3Q9UMX2 235 aa8.47□□□□□ -1.05
PHGDH-228ENST00000641847 NCKAP5O14513 1909 aa8.46□□□□□ -1.05
PHGDH-228ENST00000641847 A0A087WUJ7 227 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TMED7-TICAM2A0A0A6YYA0 188 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 C7orf72A4D263 438 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 SUSD5O60279 629 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TRAPPC6AO75865 159 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF17P17021 662 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 CCNA2P20248 432 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 CXCR1P25024 350 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 PEX2P28328 305 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 EIF1P41567 113 aaKnown RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 RBM34P42696 430 aaKnown RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 MAGEA5P43359 124 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 UGT2B15P54855 530 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 PPIAP62937 165 aaKnown RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 MICAQ29983 383 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 HYAL4Q2M3T9 481 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 SLC25A53Q5H9E4 307 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 DCST1Q5T197 706 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 LPCAT4Q643R3 524 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM211Q6ICI0 200 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 CLEC9AQ6UXN8 241 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF730Q6ZMV8 503 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 Q71RC1 249 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 YRDCQ86U90 279 aaKnown RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 SLC22A16Q86VW1 577 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 HIPK1Q86Z02 1210 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 ZDHHC13Q8IUH4 622 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 DMRTC2Q8IXT2 367 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 HS3ST5Q8IZT8 346 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 GHDCQ8N2G8 530 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 SVOPLQ8N434 492 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 FAM109AQ8N4B1 249 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 FAM83FQ8NEG4 500 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 OR10G2Q8NGC3 310 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 OR4K5Q8NGD3 323 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 OR9Q2Q8NGE9 314 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 OR14L1PQ8NHC6 308 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms