RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CTBP2P56545 445 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 FAM27E3Q08E93 113 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 CEACAM7Q14002 265 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 ZNF775Q96BV0 537 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-231ENST00000640499 MCHR1Q99705 422 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 PTDSS2Q9BVG9 487 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 GP6Q9HCN6 339 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 FOXD3Q9UJU5 478 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-231ENST00000640499 SLC13A4Q9UKG4 626 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 PROCRQ9UNN8 238 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 EMC9Q9Y3B6 208 aa23.75■■□□□ 1.39
VEGFA-231ENST00000640499 DNPH1O43598 174 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 FMO6PO60774 539 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 YES1P07947 543 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 EDNRAP25101 427 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 NTF4P34130 210 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 RASGEF1BQ0VAM2 473 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 ULK3Q6PHR2 472 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 MCEMP1Q8IX19 187 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 VANGL1Q8TAA9 524 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-231ENST00000640499 STK35Q8TDR2 534 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 SLC26A7Q8TE54 656 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 SLC38A4Q969I6 547 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 KTI12Q96EK9 354 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-231ENST00000640499 ALG2Q9H553 416 aa23.74■■□□□ 1.39
VEGFA-231ENST00000640499 IDUAP35475 653 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 P2RY4P51582 365 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 CDH12P55289 794 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 SLC35A1P78382 337 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 KRT72Q14CN4 511 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 CYBRD1Q53TN4 286 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 ALG10BQ5I7T1 473 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 C1orf140Q5VVS0 124 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 LINC00114Q6XXX2 140 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 P3H2Q8IVL5 708 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 CCDC197Q8NCU1 140 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 DNAJA4Q8WW22 397 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-231ENST00000640499 C12orf49Q9H741 205 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 TMEM27Q9HBJ8 222 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 KLHL9Q9P2J3 617 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 RPS6KB2Q9UBS0 482 aa23.73■■□□□ 1.39
VEGFA-231ENST00000640499 APCP25054 2843 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 IGKV3D-15A0A087WSY6 115 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 ELOA3DA6NLF2 546 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-231ENST00000640499 FTCDNL1E5RQL4 147 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 SLC25A3Q00325 362 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 PDK3Q15120 406 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 OR7A5Q15622 319 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 ELOA3BQ3SY89 546 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 ENTPD8Q5MY95 495 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 WDR88Q6ZMY6 472 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 RANBP3LQ86VV4 465 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-231ENST00000640499 TMEM99Q8N816 258 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 ELOA3Q8NG57 546 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 RASSF5Q8WWW0 418 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 PCDHAC1Q9H158 963 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 CRIM1Q9NZV1 1036 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 SH3GLB1Q9Y371 365 aa23.72■■□□□ 1.39
VEGFA-231ENST00000640499 A0A087WUJ7 227 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 ZNF724A8MTY0 619 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 AKR7A3O95154 331 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 CCKARP32238 428 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 CPOXP36551 454 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 PCYT1AP49585 367 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 SORDQ00796 357 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 LRRC23Q53EV4 343 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-231ENST00000640499 TMEM201Q5SNT2 666 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 PAQR6Q6TCH4 344 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 TFAP2EQ6VUC0 442 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 LINC01560Q8TB33 94 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 SLC47A1Q96FL8 570 aa23.71■■□□□ 1.39
VEGFA-231ENST00000640499 ANKHD1Q8IWZ3 2542 aaKnown RBP23.7■■□□□ 1.38
VEGFA-231ENST00000640499 CPSF4LA6NMK7 179 aaKnown RBP23.7■■□□□ 1.38
VEGFA-231ENST00000640499 CXCR6O00574 342 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 FZD7O75084 574 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 PNMTP11086 282 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 CD79BP40259 229 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 KIR2DL3P43628 341 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 SLC16A1P53985 500 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 NCALDP61601 193 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 ZNF613Q6PF04 617 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 CARM1Q86X55 608 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 TAAR8Q969N4 342 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 ZHX1-C8orf76Q96EF9 292 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 LRRC46Q96FV0 321 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 SPAG4Q9NPE6 437 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 ELOVL5Q9NYP7 299 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 ABCA12Q86UK0 2595 aa23.7■■□□□ 1.38
VEGFA-231ENST00000640499 GPIP06744 558 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 T-ENOLP0DO92 83 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 NCK1P16333 377 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 RPS5P46782 204 aaKnown RBP23.69■■□□□ 1.38
VEGFA-231ENST00000640499 OR1E2P47887 323 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 SELENOWP63302 87 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 LTBQ06643 244 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 C22orf34Q6ZV56 151 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 KIF18BQ86Y91 864 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 PGAM4Q8N0Y7 254 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 RNF148Q8N7C7 305 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 MFSD8Q8NHS3 518 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms