RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	TOMM40L	Q969M1	308 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF419	Q96HQ0	510 aa	Predicted RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF583	Q96ND8	569 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	TSSK3	Q96PN8	268 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	S100A13	Q99584	98 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	DPAGT1	Q9H3H5	408 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF629	Q9UEG4	869 aa	Predicted RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	MSRA	Q9UJ68	235 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	C10orf71	Q711Q0	1435 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	FXYD6-FXYD2	A0A087WZ82	144 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC35F4	A4IF30	521 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	CLIC1	O00299	241 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PDXK	O00764	312 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ARPC1B	O15143	372 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	AMD1	P17707	334 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	NFYA	P23511	347 aa	Predicted RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	CST5	P28325	142 aa	Predicted RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	GSK3B	P49841	420 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	LAPTM4A	Q15012	233 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ARHGAP11B	Q3KRB8	267 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	DCAF10	Q5QP82	559 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PLEKHS1	Q5SXH7	462 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	NAXD	Q8IW45	347 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	EXD3	Q8N9H8	876 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	RELL2	Q8NC24	303 aa	Predicted RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR2T11	Q8NH01	316 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PIH1D2	Q8WWB5	315 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ST6GALNAC6	Q969X2	333 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	KAZALD1	Q96I82	304 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF354B	Q96LW1	612 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	MS4A4E	Q96PG1	132 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ALG12	Q9BV10	488 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ACTRT3	Q9BYD9	372 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	FXYD6	Q9H0Q3	95 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ABCG5	Q9H222	651 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	PCIF1	Q9H4Z3	704 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF358	Q9NW07	568 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	FOXJ2	Q9P0K8	574 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072		V9GYH0	126 aa		5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072	DICER1	Q9UPY3	1922 aa	Known RBP	5.7	□□□□□ -1.5
NECAP1-222	ENST00000640072		K7EP13	123 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	EREG	O14944	169 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ANKRD28	O15084	1053 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR2T1	O43869	369 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GGCT	O75223	188 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TGFB1	P01137	390 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	JCHAIN	P01591	159 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C8orf89	P0DMQ9	161 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	HSD17B1	P14061	328 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC6A2	P23975	617 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	IFNGR2	P38484	337 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	NUMB	P49757	651 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SUMO1	P63165	101 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM115	Q12893	351 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	KIAA0141	Q14154	515 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	ZNF234	Q14588	700 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RPE65	Q16518	533 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	MRPL23	Q16540	153 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	PCK2	Q16822	640 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	BSX	Q3C1V8	233 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TFDP3	Q5H9I0	405 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	MBNL2	Q5VZF2	373 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	FIGLA	Q6QHK4	219 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GSG1L	Q6UXU4	331 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMED4	Q7Z7H5	227 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CALHM1	Q8IU99	346 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	BEND2	Q8NDZ0	799 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	DNAAF1	Q8NEP3	725 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR7G2	Q8NG99	324 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR11H7	Q8NGC8	314 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OR9I1	Q8NGQ6	314 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC2A12	Q8TD20	617 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	PSMG2	Q969U7	264 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	BPIFA2	Q96DR5	249 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	NEIL1	Q96FI4	390 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	OMD	Q99983	421 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	WDR83	Q9BRX9	315 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	URM1	Q9BTM9	101 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	PIGM	Q9H3S5	423 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC2A9	Q9NRM0	540 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	PIGV	Q9NUD9	493 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	UBQLN1	Q9UMX0	589 aa	Known RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RIC1	Q4ADV7	1423 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	AKAP11	Q9UKA4	1901 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TMEM265	A0A087WTH1	108 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GLOD5	A6NK44	160 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	HEPACAM2	A8MVW5	462 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	YY2	O15391	372 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	SLC37A4	O43826	429 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	S1PR4	O95977	384 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	TF	P02787	698 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	C8G	P07360	202 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GTF2F2	P13984	249 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	GLB1	P16278	677 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CXCL3	P19876	107 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	FPR1	P21462	350 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CD27	P26842	260 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	MTNR1A	P48039	350 aa		5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	RFX5	P48382	616 aa	Predicted RBP	5.69	□□□□□ -1.5
NECAP1-222	ENST00000640072	CXCR3	P49682	368 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms