RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ASH2LQ9UBL3 628 aa9.39□□□□□ -0.91
PTP4A1-207ENST00000639568 PCTPQ9UKL6 214 aa9.39□□□□□ -0.91
PTP4A1-207ENST00000639568 HDGFL3Q9Y3E1 203 aa9.39□□□□□ -0.91
PTP4A1-207ENST00000639568 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 A0A1W2PPW3 197 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PPIAL4DF5H284 164 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ETV2O00321 342 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PIP5K1CO60331 668 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 EIF4E2O60573 245 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ERLIN1O75477 346 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 FOXH1O75593 365 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 NCR1O76036 304 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 KRT6AP02538 564 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 KRT6BP04259 564 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 IFI6P09912 130 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 NAT2P11245 290 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 UBL4AP11441 157 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 CBR1P16152 277 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 NR4A1P22736 598 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ARR3P36575 388 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 KRT6CP48668 564 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 SESN3P58005 492 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF763Q0D2J5 394 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 DOC2BQ14184 412 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 KLF17Q5JT82 389 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 GKAP1Q5VSY0 366 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 LETMD1Q6P1Q0 360 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 FIP1L1Q6UN15 594 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF551Q7Z340 670 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 CCDC91Q7Z6B0 441 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ZBED8Q8IZ13 594 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 NOA1Q8NC60 698 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 DEFB108BQ8NET1 73 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 MAGEE2Q8TD90 523 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 SGCDQ92629 289 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 OTUB1Q96FW1 271 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 MS4A4EQ96PG1 132 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 THUMPD3Q9BV44 507 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 GATA5Q9BWX5 397 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 BTBD2Q9BX70 525 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 C1RLQ9NZP8 487 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 PURGQ9UJV8 347 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF346Q9UL40 294 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 WIPI2Q9Y4P8 454 aa9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-207ENST00000639568 MANBAO00462 879 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 ULK1O75385 1050 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 CHN1P15882 459 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 APOBEC1P41238 236 aaKnown RBP9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 CCL8P80075 99 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 BTKQ06187 659 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 SLC17A1Q14916 467 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 TECRLQ5HYJ1 363 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 CDC73Q6P1J9 531 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 TMEM154Q6P9G4 183 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 ZCCHC12Q6PEW1 402 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 MYPOPQ86VE0 399 aaPredicted RBP9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 APIPQ96GX9 242 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 UBAP1Q9NZ09 502 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 SEC14L4Q9UDX3 406 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 CHRNA9Q9UGM1 479 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 GPR160Q9UJ42 338 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 DTNAQ9Y4J8 743 aa9.37□□□□□ -0.91
PTP4A1-207ENST00000639568 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ISPDA4D126 451 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 AGAP5A6NIR3 686 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 PGRMC1O00264 195 aaKnown RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ANKRD28O15084 1053 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 TPD52L2O43399 206 aaKnown RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 MAGEB1P43366 347 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ASMTP46597 345 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 CAPZA2P47755 286 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 CLK1P49759 484 aaKnown RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ATP12AP54707 1039 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 RPS23P62266 143 aaKnown RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 SLC35A1P78382 337 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 H3F3AP84243 136 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 RELBQ01201 579 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF154Q13106 437 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 HFEQ30201 348 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 SPDYAQ5MJ70 313 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 JAZF1Q86VZ6 243 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms