RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 NAXDQ8IW45 347 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 LSM14AQ8ND56 463 aaKnown RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 OR7G2Q8NG99 324 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 DOK4Q8TEW6 326 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 ZNF707Q96C28 371 aaPredicted RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 ZNF681Q96N22 645 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 FOXJ3Q9UPW0 622 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 PRELID3BQ9Y3B1 194 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 WDR45Q9Y484 360 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 TRBV2A0A0J9YWF9 115 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 IFITM5A6NNB3 132 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 RIIAD1A6NNX1 92 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 IDSB3KWA1 339 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 HPP00738 406 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 TMIGD3P0DMS9 266 aaPredicted RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 AP3S2P59780 193 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 RIPPLY1Q0D2K3 151 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 ZC3H14Q6PJT7 736 aaKnown RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 CDH26Q8IXH8 852 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 MOAP1Q96BY2 351 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 UTP23Q9BRU9 249 aaKnown RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 HCFC1R1Q9NWW0 138 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 TAS2R10Q9NYW0 307 aa18.88■□□□□ 0.61
PMS1-222ENST00000639501 USP36Q9P275 1121 aaKnown RBP18.88■□□□□ 0.61
PMS1-222ENST00000639501 TRAPPC13A5PLN9 417 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 LDOC1O95751 146 aaPredicted RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 SNRPNP63162 240 aaKnown RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 ARHGAP19Q14CB8 494 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 OR1Q1Q15612 314 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 AMZ2Q86W34 360 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 EIF4E3Q8N5X7 224 aaKnown RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 SYNPRQ8TBG9 265 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 STK35Q8TDR2 534 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 BPIFA2Q96DR5 249 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 LRRC46Q96FV0 321 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 MEPEQ9NQ76 525 aaPredicted RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 HPF1Q9NWY4 346 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 GPR34Q9UPC5 381 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 HMSDA8MTL9 139 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 SRMP19623 302 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 CDK2P24941 298 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 EDNRAP25101 427 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 SIRPAP78324 504 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 IL10RAQ13651 578 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 UBXN2BQ14CS0 331 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 ABHD17CQ6PCB6 329 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 GPN1Q9HCN4 374 aaPredicted RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 AKAP7Q9P0M2 348 aaPredicted RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 GNG8Q9UK08 70 aa18.87■□□□□ 0.61
PMS1-222ENST00000639501 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.87■□□□□ 0.61
PMS1-222ENST00000639501 SNRPGP15A8MWD9 76 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 CXCL10P02778 98 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 IL5P05113 134 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 B2MP61769 119 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 FAM74A1Q5RGS3 127 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 TMEM69Q5SWH9 247 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 MFSD12Q6NUT3 480 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 ARRDC3Q96B67 414 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 ZNF514Q96K75 400 aaPredicted RBP18.86■□□□□ 0.61
PMS1-222ENST00000639501 SLC6A15Q9H2J7 730 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 SPHK2Q9NRA0 654 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 CXXC1Q9P0U4 656 aaPredicted RBP18.86■□□□□ 0.61
PMS1-222ENST00000639501 SCN2AQ99250 2005 aa18.86■□□□□ 0.61
PMS1-222ENST00000639501 GOSR2O14653 212 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 RCBTB2O95199 551 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MPIP34949 423 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ACTC1P68032 377 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ACTA1P68133 377 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 DEFA5Q01523 94 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 PLA2G7Q13093 441 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 CBFBQ13951 182 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 DUSP5Q16690 384 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 PWWP2BQ6NUJ5 590 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 SLC36A1Q7Z2H8 476 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 SDR9C7Q8NEX9 313 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 C1orf216Q8TAB5 229 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ZNRF4Q8WWF5 429 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 TCEAL4Q96EI5 215 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 LRIG1Q96JA1 1093 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MFRPQ9BY79 579 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 C2orf42Q9NWW7 574 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MED11Q9P086 117 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 OR5V1Q9UGF6 321 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MRTO4Q9UKD2 239 aaKnown RBP18.85■□□□□ 0.61
PMS1-222ENST00000639501 TMEM272A0A1B0GTI8 110 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 PSMD9O00233 223 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 TGM5O43548 720 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ITGA10O75578 1167 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ZNF3P17036 446 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MECP2P51608 486 aaKnown RBP18.85■□□□□ 0.61
PMS1-222ENST00000639501 FGL2Q14314 439 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 ZIC1Q15915 447 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 OR2A1Q8NGT9 310 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 OR4C6Q8NH72 309 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 COL26A1Q96A83 441 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 FBXO34Q9NWN3 711 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 GMEB2Q9UKD1 530 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 MOKQ9UQ07 419 aa18.85■□□□□ 0.61
PMS1-222ENST00000639501 KLF2Q9Y5W3 355 aaPredicted RBP18.85■□□□□ 0.61
PMS1-222ENST00000639501 IMPA2O14732 288 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms