RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CCINQ13939 588 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SIMC1Q8NDZ2 872 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 ADAMTS14Q8WXS8 1223 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 RNF215Q9Y6U7 377 aa13.37□□□□□ -0.27
SCARB2-216ENST00000639300 SVILO95425 2214 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 FGF17O60258 216 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 SLC35E2P0CK97 266 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 CLUP10909 449 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 TIAL1Q01085 375 aaKnown RBP eCLIP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 NKAIN2Q5VXU1 208 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF836Q6ZNA1 936 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 TCTN2Q96GX1 697 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 C6orf106Q9H6K1 298 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 INPP5EQ9NRR6 644 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF226Q9NYT6 803 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 HLA-DMAP28067 261 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 CXCL12P48061 93 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 DUSP3P51452 185 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 AIMP2Q13155 320 aaKnown RBP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM150AQ86TG1 271 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 NANOGP1Q8N7R0 232 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 DYNC2LI1Q8TCX1 351 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 SLC6A18Q96N87 628 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 NEDD4LQ96PU5 975 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 OR14A2Q96R54 314 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 PDCD1LG2Q9BQ51 273 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 NT5DC2Q9H857 520 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 CHRNB1P11230 501 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF16P17020 682 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 SSTR2P30874 369 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 PLP2Q04941 152 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 FAHD1Q6P587 224 aa13.36□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF775Q96BV0 537 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM269A0A1B0GVZ9 245 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CENPBD1B2RD01 187 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ALDOBP05062 364 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 HSD11B2P80365 405 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 DLX2Q07687 328 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ATAD3CQ5T2N8 411 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 RPL22L1Q6P5R6 122 aaKnown RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 FAM26EQ8N5C1 309 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM106AQ96A25 262 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 DDIT4LQ96D03 193 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 PLCXD1Q9NUJ7 323 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 RBFOX1Q9NWB1 397 aaKnown RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ZDBF2Q9HCK1 2354 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 IGLV3-16A0A075B6K0 115 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 SULT2B1O00204 365 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 NID1P14543 1247 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 WNT3P56703 355 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 SFXN4Q6P4A7 337 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 HOXB13Q92826 284 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 GABARAPL3Q9BY60 117 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 FGF21Q9NSA1 209 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 HHLA2Q9UM44 414 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF281Q9Y2X9 895 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 OLFM2O95897 454 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 OR2T7P0C7T2 308 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 TGM4P49221 684 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CBFBQ13951 182 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 OR2T27Q8NH04 317 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 RASD2Q96D21 266 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 NUBP2Q9Y5Y2 271 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ANKRD31Q8N7Z5 1873 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CTNSO60931 367 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CEACAM5P06731 702 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 SRYQ05066 204 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 GPR139Q6DWJ6 353 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 TPRA1Q86W33 373 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 KDM8Q8N371 416 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 CCDC54Q8NEL0 328 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
SCARB2-216ENST00000639300 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF850A8MQ14 1090 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 P04436 131 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SLC6A19Q695T7 634 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 HBMQ6B0K9 141 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SLC35F3Q8IY50 421 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 OR14L1PQ8NHC6 308 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 TEAD3Q99594 435 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 GPRIN2O60269 458 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ST6GAL1P15907 406 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 TSFMP43897 325 aaKnown RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 HNRNPFP52597 415 aaKnown RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 CXADRP78310 365 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 TMEM196Q5HYL7 178 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms