RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 LHX2P50458 406 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 IL1RL1Q01638 556 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 KLRB1Q12918 225 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 CTU2Q2VPK5 515 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 C1orf140Q5VVS0 124 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 C3orf33Q6P1S2 294 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZDHHC13Q8IUH4 622 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 EME1Q96AY2 570 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 BPIFA2Q96DR5 249 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF845Q96IR2 970 aaPredicted RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 MED31Q9Y3C7 131 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 MRPS18CQ9Y3D5 142 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 C7orf72A4D263 438 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 A8MVM7 634 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF814B7Z6K7 855 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 NPIPA2E9PIF3 369 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 NPIPA3F8WFD2 350 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 PRB1P04280 392 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ADH6P28332 368 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 OR7A5Q15622 319 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 RRM2BQ7LG56 351 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ABTB1Q969K4 478 aaPredicted RBP13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 TIMP4Q99727 224 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
CNTNAP2-225ENST00000639247 SHANK1Q9Y566 2161 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 TRAV27A0A087WT01 109 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 RAMP1O60894 148 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 SOX14O95416 240 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF17P17021 662 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 PTDSS1P48651 473 aaKnown RBP13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 CLDN18P56856 261 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 SMIM11AP58511 58 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 RAC1P63000 192 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF324BQ6AW86 544 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 SLC46A3Q7Z3Q1 461 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 KDM8Q8N371 416 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 ATG16L2Q8NAA4 619 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 OR13C2Q8NGS9 318 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 OR51A7Q8NH64 312 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 MAGEE2Q8TD90 523 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 FAR1Q8WVX9 515 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 NR4A3Q92570 626 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 SRXN1Q9BYN0 137 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 CHD6Q8TD26 2715 aa13.05□□□□□ -0.32
CNTNAP2-225ENST00000639247 IGHG3P01860 377 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF26P17031 533 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 HOXB6P17509 224 aaKnown RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 EPHA2P29317 976 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 PRKCDQ05655 676 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 VASNQ6EMK4 673 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZBTB49Q6ZSB9 765 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 UCN2Q96RP3 112 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 TMEM43Q9BTV4 400 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 C12orf10Q9HB07 376 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 HHATLQ9HCP6 504 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 QPCTLQ9NXS2 382 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 AKR7A3O95154 331 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 SAGP10523 405 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 RBM34P42696 430 aaKnown RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 EIF1AXP47813 144 aaKnown RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 DIO1P49895 249 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 DBPQ10586 325 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 FHL1Q13642 323 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF74Q16587 644 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZIK1Q3SY52 487 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 PPP4R4Q6NUP7 873 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 CCDC103Q8IW40 242 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 PIGXQ8TBF5 258 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 DDIT4LQ96D03 193 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 HS6ST2Q96MM7 605 aa13.04□□□□□ -0.32
CNTNAP2-225ENST00000639247 TRAV36DV7A0A075B6V5 113 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 ZNF208O43345 1280 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 KLF4O43474 513 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 CXCL13O43927 109 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 BGLAPP02818 100 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 ENPP1P22413 925 aa13.03□□□□□ -0.32
CNTNAP2-225ENST00000639247 CHMP24386 653 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms