RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 HES5Q5TA89 166 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ANKRD20A1Q5TYW2 823 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ANKRD20A3Q5VUR7 823 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 OR2A2Q6IF42 318 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ACSM5Q6NUN0 579 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 MIER3Q7Z3K6 550 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF571Q7Z3V5 609 aaPredicted RBP-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ZCCHC24Q8N2G6 241 aaKnown RBP-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 CIRBP-AS1Q8TBR5 109 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 IP6K3Q96PC2 410 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 TBL1YQ9BQ87 522 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 MRPL32Q9BYC8 188 aaKnown RBP-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 CTPS2Q9NRF8 586 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 PGAP2Q9UHJ9 254 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ENOPH1Q9UHY7 261 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ENTPD4Q9Y227 616 aa-0.97□□□□□ -2.56
LMBR1-222ENST00000638959 ADGRA3Q8IWK6 1321 aa-0.97□□□□□ -2.57
LMBR1-222ENST00000638959 TICRRQ7Z2Z1 1910 aa-0.97□□□□□ -2.57
LMBR1-222ENST00000638959 ANKRD12Q6UB98 2062 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 A0A087WV48 116 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CENPVL3A0A0U1RRI6 287 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 SLC31A2O15432 143 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 ATP9AO75110 1047 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 GMNNO75496 209 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 H6PDO95479 791 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 HLA-DQB1P01920 261 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 FAM58BPP0C7Q3 252 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 MAGEA6P43360 314 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 IL1RL1Q01638 556 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 ARHGAP1Q07960 439 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CUL4AQ13619 759 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 ATP6AP1Q15904 470 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 HYAL4Q2M3T9 481 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 TTLL9Q3SXZ7 439 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 LRRC38Q5VT99 294 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 AMMECR1LQ6DCA0 310 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 PODNL1Q6PEZ8 512 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CD164L2Q6UWJ8 174 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 ASPGQ86U10 573 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CALHM1Q8IU99 346 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 LRRC43Q8N309 656 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CHCHD6Q9BRQ6 235 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 C20orf85Q9H1P6 137 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 SRMSQ9H3Y6 488 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 B3GNT2Q9NY97 397 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 ZNF492Q9P255 531 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CLCF1Q9UBD9 225 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 NPIPA1Q9UND3 350 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 MRPS2Q9Y399 296 aaKnown RBP-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 CBY1Q9Y3M2 126 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 GMPPBQ9Y5P6 360 aa-0.98□□□□□ -2.57
LMBR1-222ENST00000638959 C2orf16Q68DN1 1984 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 DOCK6Q96HP0 2047 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 AHDC1Q5TGY3 1603 aaPredicted RBP-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 GABARAPO95166 117 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 NAPSAO96009 420 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 RLN1P04808 185 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 BTCP35070 178 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 NOVA1P51513 510 aaKnown RBP-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 CDH4P55283 916 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 BIKQ13323 160 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 ZNF141Q15928 474 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 EPC2Q52LR7 807 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 STRADAQ7RTN6 431 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 PCGF5Q86SE9 256 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 KLHDC8AQ8IYD2 350 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 DNAAF3Q8N9W5 541 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 COQ8AQ8NI60 647 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 TMEM37Q8WXS4 190 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 CDKN2AIPNLQ96HQ2 116 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 WFIKKN1Q96NZ8 548 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 TXNDC17Q9BRA2 123 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 SDF4Q9BRK5 362 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 ACPTQ9BZG2 426 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 GTF2A1LQ9UNN4 478 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 SNX8Q9Y5X2 465 aa-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 F11RQ9Y624 299 aaKnown RBP-0.99□□□□□ -2.57
LMBR1-222ENST00000638959 C9JVG2 144 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 H3BNH8 94 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 BPY2O14599 106 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 BCHEP06276 602 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 HIST1H2AGP0C0S8 130 aaPredicted RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 POU2F1P14859 743 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 ATF6P18850 670 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 CASTP20810 708 aaKnown RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 SHMT2P34897 504 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 GLP1RP43220 463 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 IDH2P48735 452 aaKnown RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 CSNK1EP49674 416 aaKnown RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 ZNF140P52738 457 aaPredicted RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 SLC7A9P82251 487 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 LAGE3Q14657 143 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 GINS1Q14691 196 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 COG2Q14746 738 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 JAKMIP3Q5VZ66 844 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 TIGD3Q6B0B8 471 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 LCN12Q6JVE5 192 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 KRT80Q6KB66 452 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 MMS22LQ6ZRQ5 1243 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 HIST2H2ABQ8IUE6 130 aaPredicted RBP-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms