RNA–Protein interactions for RNA: ENST00000638481.1

SPIN3-208, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 2,050 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-208	ENST00000638481	RNF121	Q9H920	327 aa		13.7	□□□□□ -0.22
SPIN3-208	ENST00000638481	GVINP1	Q7Z2Y8	2422 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRDV1	A0A1B0GX56	115 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	FAM25A	B3EWG3	89 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	FAM25C	B3EWG5	89 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	FAM25G	B3EWG6	89 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481		B4DXG7	233 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	PTBP1	P26599	531 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	RGS8	P57771	180 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	PLAUR	Q03405	335 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	TSPAN31	Q12999	210 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRAM2	Q15035	370 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	OR2G6	Q5TZ20	316 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	ZNF614	Q8N883	585 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	ANKK1	Q8NFD2	765 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	METTL21A	Q8WXB1	218 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	GATAD2B	Q8WXI9	593 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	RFK	Q969G6	155 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	ADIPOR1	Q96A54	375 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	LIN37	Q96GY3	246 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	DMRTB1	Q96MA1	342 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	NRSN2	Q9GZP1	204 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	ANKRD19P	Q9H560	264 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	KLHL28	Q9NXS3	571 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	COPS7A	Q9UBW8	275 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481	PISD	Q9UG56	409 aa		13.69	□□□□□ -0.22
SPIN3-208	ENST00000638481		A0A1W2PNU3	283 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	SYNDIG1L	A6NDD5	238 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481		A8MV72	311 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	GAA	P10253	952 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	HLA-DMA	P28067	261 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PPIC	P45877	212 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	GPR143	P51810	404 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRIP6	Q15654	476 aa	Known RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	DCAF12	Q5T6F0	453 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRIQK	Q629K1	86 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	CD200R1L	Q6Q8B3	271 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PIGX	Q8TBF5	258 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TM9SF4	Q92544	642 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PRRX2	Q99811	253 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	ARHGAP9	Q9BRR9	750 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PLA2G12A	Q9BZM1	189 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	EGLN3	Q9H6Z9	239 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	NTNG1	Q9Y2I2	539 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	FREM2	Q5SZK8	3169 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481		A0A087WUU8	490 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	C2orf92	A0A1B0GVN3	265 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	CDC14C	A4D256	554 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	CDHR4	A6H8M9	788 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	MT-CO3	P00414	261 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	NBL1	P41271	181 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	EIPR1	Q53HC9	387 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	STPG1	Q5TH74	334 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	MZT2B	Q6NZ67	158 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TCTE3	Q8IZS6	198 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	C19orf18	Q8NEA5	215 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PMM1	Q92871	262 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRIM63	Q969Q1	353 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	C8orf44	Q96CB5	159 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	LCOR	Q96JN0	433 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	WDR77	Q9BQA1	342 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	TTYH2	Q9BSA4	534 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	G6PC3	Q9BUM1	346 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	WWTR1	Q9GZV5	400 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	RERGL	Q9H628	205 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	WDR54	Q9H977	334 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	ACOXL	Q9NUZ1	547 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	GPN3	Q9UHW5	284 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	YARS2	Q9Y2Z4	477 aa	Known RBP	13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	PCDHGA1	Q9Y5H4	931 aa		13.68	□□□□□ -0.22
SPIN3-208	ENST00000638481	FRG2C	A6NGY1	282 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	CPSF4L	A6NMK7	179 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	NPIPB9	F8W1W9	429 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	CASK	O14936	926 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRIM3	O75382	744 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	STK17B	O94768	372 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	HLA-DQB1	P01920	261 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	GUSB	P08236	651 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	JMJD7	P0C870	316 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	MAP2K3	P46734	347 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	GALK2	Q01415	458 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	FABP5	Q01469	135 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	HES3	Q5TGS1	186 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	PAPD4	Q6PIY7	484 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	RRM2B	Q7LG56	351 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	APCDD1L	Q8NCL9	501 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	OSTF1	Q92882	214 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	ARSG	Q96EG1	525 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	RANGRF	Q9HD47	186 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	PLSCR3	Q9NRY6	295 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	ZNF223	Q9UK11	482 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	BOLA1	Q9Y3E2	137 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	FAM186A	A6NE01	2351 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481		A0A0B4J293	547 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	AKAP8	O43823	692 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	APOL3	O95236	402 aa		13.67	□□□□□ -0.22
SPIN3-208	ENST00000638481	GKN3P	P0CG01	181 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms