RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LCTLQ6UWM7 567 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 PCNPQ8WW12 178 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OSBPL7Q9BZF2 842 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OCEL1Q9H607 264 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 WDR76Q9H967 626 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A8P0DMV1 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A9P0DMV2 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 RAB5BP61020 215 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC36A2Q495M3 483 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 YIF1BQ5BJH7 314 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A2Q5DJT8 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A1Q5HYN5 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 LETMD1Q6P1Q0 360 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 CT45A3Q8NHU0 189 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 UTP4Q969X6 686 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 BPIFA2Q96DR5 249 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF732B4DXR9 585 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ADAM23O75077 832 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 RPL26P61254 145 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 C19orf47Q8N9M1 422 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OR10AD1Q8NGE0 317 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ASB11Q8WXH4 323 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 DPF1Q92782 380 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 FYTTD1Q96QD9 318 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC46A2Q9BY10 475 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 KIAA1456Q9P272 454 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 KIF25Q9UIL4 384 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 RPL26L1Q9UNX3 145 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 LRRC30A6NM36 301 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 P2RY10O00398 339 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 KLK10O43240 276 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 TAZQ16635 292 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 OLIG3Q7RTU3 272 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 GPR26Q8NDV2 337 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ADAMTS18Q8TE60 1221 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 ACOT11Q8WXI4 607 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 TIMD4Q96H15 378 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 NTPCRQ9BSD7 190 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
CACNA1A-227ENST00000636549 MED6O75586 246 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 ELLP55199 621 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 GPR18Q14330 331 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 TMEM179BQ7Z7N9 219 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 OR13C2Q8NGS9 318 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC35B2Q8TB61 432 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 TVP23CQ96ET8 276 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 A8MVM7 634 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF587BE7ETH6 402 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC6A8P48029 635 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 CTSCP53634 463 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 SH3BP2P78314 561 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 CHTF18Q8WVB6 975 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 FAM103A1Q9BTL3 118 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 A0A0B4J2A0 478 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 RGNQ15493 299 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 DESI1Q6ICB0 168 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 NICN1Q9BSH3 213 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 SHPKQ9UHJ6 478 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 ANKRD61A6NGH8 418 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 MCRIP1C9JLW8 97 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 PRRG2O14669 202 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 PIAS2O75928 621 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 FGF3P11487 239 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 CD320Q9NPF0 282 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 NXT1Q9UKK6 140 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 C17orf113A0A1B0GUU1 675 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 FOXA1P55317 472 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 P2RX3P56373 397 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 P2RY12Q9H244 342 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 MRPS2Q9Y399 296 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 ELAVL4P26378 380 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF789Q5FWF6 425 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 CHST6Q9GZX3 395 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 PTTG2Q9NZH5 202 aa16.62■□□□□ 0.25
CACNA1A-227ENST00000636549 H0YGG7 62 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 OIP5O43482 229 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 LY86O95711 162 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 PRKACAP17612 351 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 OR8G1Q15617 311 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 PRR7Q8TB68 274 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNRF4Q8WWF5 429 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 MYADMQ96S97 322 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA1BP68363 451 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA4AP68366 448 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ARL6IP1Q15041 203 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 ACSM3Q53FZ2 586 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBA1AQ71U36 451 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 IQCKQ8N0W5 287 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 MAF1Q9H063 256 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 PATZ1Q9HBE1 687 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 PCDHA9Q9Y5H5 950 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC35G3Q8N808 338 aa16.61■□□□□ 0.25
CACNA1A-227ENST00000636549 OR4F15Q8NGB8 312 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms