RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CCDC59Q9P031 241 aaKnown RBP6.57□□□□□ -1.36
BRCA1-230ENST00000634433 B3GNT3Q9Y2A9 372 aa6.57□□□□□ -1.36
BRCA1-230ENST00000634433 LSM2Q9Y333 95 aaKnown RBP6.57□□□□□ -1.36
BRCA1-230ENST00000634433 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-230ENST00000634433 THADAQ6YHU6 1953 aa6.57□□□□□ -1.36
BRCA1-230ENST00000634433 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
BRCA1-230ENST00000634433 TRAV34A0A0B4J273 112 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LOC100506127A0A0U1RQW1 187 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 A0A1B0GTQ1 180 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 FRG2CA6NGY1 282 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR6C76A6NM76 312 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 HRKO00198 91 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 CSO75390 466 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 GIMD1P0DJR0 217 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SAGP10523 405 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 FOLR1P15328 257 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF12P17014 697 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 EPHA8P29322 1005 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 HTR1FP30939 366 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PTGS2P35354 604 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ACAA2P42765 397 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR1D4P47884 311 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 CDH11P55287 796 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SLC37A1P57057 533 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PSMA6P60900 246 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 CFHR1Q03591 330 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ALG10BQ5I7T1 473 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 HLA-DQA1Q5Y7H0 255 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PMS2CLQ68D20 193 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SMARCD3Q6STE5 483 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 MEX3DQ86XN8 651 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PSD4Q8NDX1 1056 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR4N2Q8NGD1 307 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR4Q3Q8NH05 313 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SLC22A8Q8TCC7 542 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 RNF125Q96EQ8 232 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LCORQ96JN0 433 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR5M11Q96RB7 305 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 USB1Q9BQ65 265 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 HHATLQ9HCP6 504 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 FGF21Q9NSA1 209 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 A8MU76 341 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SCDO00767 359 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ARHGAP33O14559 1287 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LAMTOR5O43504 91 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 IFNGP01579 166 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 MAKP20794 623 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PTBP1P26599 531 aaKnown RBP eCLIP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SLC9A3P48764 834 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 WNT4P56705 351 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SHBQ15464 509 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF404Q494X3 552 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 KLHL26Q53HC5 615 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 HSDL2Q6YN16 418 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 RTL4Q6ZR62 310 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 CXXC5Q7LFL8 322 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 BCDIN3DQ7Z5W3 292 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LAPTM4BQ86VI4 370 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 LNX2Q8N448 690 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 TMEM105Q8N8V8 129 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 FAM181AQ8N9Y4 354 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 DTWD2Q8NBA8 298 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PLPP5Q8NEB5 264 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR6Q1Q8NGQ2 317 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR4C6Q8NH72 309 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PFN4Q8NHR9 129 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 MCFD2Q8NI22 146 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 POC1BQ8TC44 478 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 GRHL3Q8TE85 626 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 RPL3LQ92901 407 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF501Q96CX3 271 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 PERPQ96FX8 193 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OPALINQ96PE5 141 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 TAPBPLQ9BX59 468 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 OR51E2Q9H255 320 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 EXOSC3Q9NQT5 275 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 ZFP57Q9NU63 452 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 COPS7AQ9UBW8 275 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 SSR3Q9UNL2 185 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 EXOGQ9Y2C4 368 aaKnown RBP6.56□□□□□ -1.36
BRCA1-230ENST00000634433 DTX4Q9Y2E6 619 aa6.56□□□□□ -1.36
BRCA1-230ENST00000634433 GTPBP1O00178 669 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CDC42EP2O14613 210 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CH25HO95992 272 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 IGF2P01344 180 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 HBQ1P09105 142 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 TSPAN19P0C672 248 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ANKRD34CP0C6C1 535 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PNMTP11086 282 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 HK1P19367 917 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PAICSP22234 425 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC6A6P31641 620 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CSF2RBP32927 897 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 OPRL1P41146 370 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 TRA2AQ13595 282 aaKnown RBP eCLIP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 POU4F3Q15319 338 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms