RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF682O95780 498 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CD8BP10966 210 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PPIBP23284 216 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SOX3P41225 446 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PIGFQ07326 219 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 LRRC74AQ0VAA2 488 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 STX4Q12846 297 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 MOGQ16653 247 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ANKDD1AQ495B1 522 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF385BQ569K4 471 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TOR1AIP1Q5JTV8 583 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 BICRALQ6AI39 1079 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 GALNT10Q86SR1 603 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 LAS2Q8IYD9 372 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 C1orf52Q8N6N3 182 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PLPP5Q8NEB5 264 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 B3GNT7Q8NFL0 401 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 BPIFB6Q8NFQ5 453 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 HUS1BQ8NHY5 278 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 YIPF6Q96EC8 236 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SNX22Q96L94 193 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 EPYCQ99645 322 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 EHD1Q9H4M9 534 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM160Q9NX00 188 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TSC22D4Q9Y3Q8 395 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ORC6Q9Y5N6 252 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SLC22A7Q9Y694 548 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 EEF1E1-BLOC1S5C9J1V9 151 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 hCG_2039718K7EN88 272 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CLDN4O14493 209 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EEF1E1O43324 174 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CLPXO76031 633 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 INMTO95050 263 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ANGPTL1O95841 491 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 HPCAL1P37235 193 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 KIR2DL3P43628 341 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 GSK3AP49840 483 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 BMXP51813 675 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TPD52P55327 224 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EMX1Q04741 257 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SPCS2Q15005 226 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 MAD2L1BPQ15013 274 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 RGNQ15493 299 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FLYWCH1Q4VC44 716 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 CPTPQ5TA50 214 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ANXA8L1Q5VT79 327 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF621Q6ZSS3 439 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 MFSD9Q8NBP5 474 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PHF10Q8WUB8 498 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF775Q96BV0 537 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PPP1R14BQ96C90 147 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PRTFDC1Q9NRG1 225 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EXD2Q9NVH0 621 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FAIMQ9NVQ4 179 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 URADA6NGE7 173 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF99A8MXY4 864 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PCDH7O60245 1069 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 LDB3O75112 727 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 BCAS1O75363 584 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ZFAND5O76080 213 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 BCL10O95999 233 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 ANXA4P09525 319 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 GAAP10253 952 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 FSTP19883 344 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EFNA1P20827 205 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 DNASE1P24855 282 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 EPHA2P29317 976 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 KRT20P35900 424 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 MAN2A2P49641 1150 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 DLX5P56178 289 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 RPS13P62277 151 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 IL5RAQ01344 420 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 DDX39BQ13838 428 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SYT6Q5T7P8 510 aaPredicted RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 MED27Q6P2C8 311 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 HSDL2Q6YN16 418 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 LINC00299Q6ZSB3 139 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 GALNT5Q7Z7M9 940 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SLC22A16Q86VW1 577 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TGIF2LYQ8IUE0 185 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 OR4N5Q8IXE1 308 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 PARP8Q8N3A8 854 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SMYD1Q8NB12 490 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 APCDD1LQ8NCL9 501 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 OR2M7Q8NG81 312 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 OR4C15Q8NGM1 316 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 UTP15Q8TED0 518 aaKnown RBP4.39□□□□□ -1.71
LINC00550-201ENST00000629293 APH1BQ8WW43 257 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 SLC5A11Q8WWX8 675 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 AIF1LQ9BQI0 150 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 TTTY12Q9BZ98 90 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 RAD21L1Q9H4I0 556 aa4.39□□□□□ -1.71
LINC00550-201ENST00000629293 RIBC2Q9H4K1 309 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms