RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C17orf78Q8N4C9 275 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 ARIH2OSQ8N7S6 290 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 ANKFN1Q8N957 763 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
SMN2-215ENST00000628696 AMBRA1Q9C0C7 1298 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 TMEM160Q9NX00 188 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 MOKQ9UQ07 419 aa16.6■□□□□ 0.25
SMN2-215ENST00000628696 ZC3H12DA2A288 527 aaKnown RBP16.59■□□□□ 0.25
SMN2-215ENST00000628696 HMGN4O00479 90 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 KLF11O14901 512 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 ZNF208O43345 1280 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 WNT11O96014 354 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 F12P00748 615 aaPredicted RBP16.59■□□□□ 0.25
SMN2-215ENST00000628696 MYZAPP0CAP1 466 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 MPGP29372 298 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 S100A3P33764 101 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 PDLIM4P50479 330 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 GGTLC2Q14390 218 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 CASP8Q14790 479 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 SLC17A1Q14916 467 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 SYPL1Q16563 259 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 CARTPTQ16568 116 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
SMN2-215ENST00000628696 AP1ARQ63HQ0 302 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 AAED1Q7RTV5 226 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 TESCQ96BS2 214 aa16.59■□□□□ 0.25
SMN2-215ENST00000628696 ROPN1BQ9BZX4 212 aaPredicted RBP16.59■□□□□ 0.25
SMN2-215ENST00000628696 ROPN1Q9HAT0 212 aaPredicted RBP16.59■□□□□ 0.25
SMN2-215ENST00000628696 TYROBPO43914 113 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 SLC1A3P43003 542 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 ETV4P43268 484 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 GZMKP49863 264 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 NME5P56597 212 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 ABCE1P61221 599 aaKnown RBP16.58■□□□□ 0.24
SMN2-215ENST00000628696 CEACAM7Q14002 265 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 FAM174BQ3ZCQ3 159 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 HIKESHIQ53FT3 197 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 PAQR6Q6TCH4 344 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 CMIPQ8IY22 773 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 TMEM99Q8N816 258 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 WDR60Q8WVS4 1066 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 C3orf49Q96BT1 292 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 TRNT1Q96Q11 434 aaKnown RBP16.58■□□□□ 0.24
SMN2-215ENST00000628696 SLC38A1Q9H2H9 487 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 CHODLQ9H9P2 273 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 FKBP7Q9Y680 259 aa16.58■□□□□ 0.24
SMN2-215ENST00000628696 CFAP73A6NFT4 308 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 AGAP5A6NIR3 686 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 KRT33AO76009 404 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 AKR7A3O95154 331 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 SERPINE1P05121 402 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 CHRM4P08173 479 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 UQCRBP14927 111 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 IL7RP16871 459 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 LBPP18428 481 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 CLNS1AP54105 237 aaKnown RBP16.57■□□□□ 0.24
SMN2-215ENST00000628696 GNA13Q14344 377 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 OR7A5Q15622 319 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 MST1LQ2TV78 715 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 KRTAP24-1Q3LI83 254 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 OR9K2Q8NGE7 335 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 AURKBQ96GD4 344 aaPredicted RBP16.57■□□□□ 0.24
SMN2-215ENST00000628696 ZNF385AQ96PM9 386 aaKnown RBP16.57■□□□□ 0.24
SMN2-215ENST00000628696 VRK1Q99986 396 aaPredicted RBP16.57■□□□□ 0.24
SMN2-215ENST00000628696 KCNS3Q9BQ31 491 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 MTHFD2LQ9H903 347 aaPredicted RBP16.57■□□□□ 0.24
SMN2-215ENST00000628696 KCNS2Q9ULS6 477 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 RAP2CQ9Y3L5 183 aa16.57■□□□□ 0.24
SMN2-215ENST00000628696 LOC100289279A0A1B0GTE1 492 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 CCDC154A6NI56 674 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 E9PBE3 544 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 GPIP06744 558 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 NR2F1P10589 423 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 SRD5A1P18405 259 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 CXCR1P25024 350 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 RPL14P50914 215 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 SNRPD2P62316 118 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 SRSF2Q01130 221 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 EPS8Q12929 822 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 SWI5Q1ZZU3 235 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 DPY19L1Q2PZI1 675 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 MRPL2Q5T653 305 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 FAM166AQ6J272 317 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 LRRC74BQ6ZQY2 392 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 ZNF621Q6ZSS3 439 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 IL17RELQ6ZVW7 336 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 ZIC4Q8N9L1 334 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 POMGNT2Q8NAT1 580 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 PNPT1Q8TCS8 783 aaKnown RBP16.56■□□□□ 0.24
SMN2-215ENST00000628696 TMEM45BQ96B21 275 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 CCDC115Q96NT0 180 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 SORCS2Q96PQ0 1159 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 PANX1Q96RD7 426 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 PIMREGQ9BSJ6 248 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 NUF2Q9BZD4 464 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 BTNL2Q9UIR0 455 aa16.56■□□□□ 0.24
SMN2-215ENST00000628696 LIPT2A6NK58 231 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms