RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 SLC1A3P43003 542 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 LGALS3BPQ08380 585 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 SPATA19Q7Z5L4 167 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 P2RY8Q86VZ1 359 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 CMIPQ8IY22 773 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 UBE2J2Q8N2K1 259 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 C10orf111Q8N326 155 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 MGARPQ8TDB4 240 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 ASB6Q9NWX5 421 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 TAS2R16Q9NYV7 291 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 SPIN1Q9Y657 262 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 ARFGEF3Q5TH69 2177 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 CFAP73A6NFT4 308 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 LIPT2A6NK58 231 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 NPIPB7O75200 414 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 AKR7A3O95154 331 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 NUDT7P0C024 238 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 TTKP33981 857 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 PDCD4Q53EL6 469 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 CASP12Q6UXS9 341 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 LINGO2Q7L985 606 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC38A5Q8WUX1 472 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 GTPBP3Q969Y2 492 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 TRMT61AQ96FX7 289 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 CACNG6Q9BXT2 260 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 THAP1Q9NVV9 213 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
SOX2-OT-241ENST00000626948 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 CCT8L1PA6NM43 557 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 RFXANKO14593 260 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 GPR171O14626 319 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 SSX4O60224 188 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 BCHEP06276 602 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 DBIP07108 87 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZCCHC18P0CG32 403 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 NR2F1P10589 423 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 IL7RP16871 459 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 MAGEA8P43361 318 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 HTR3AP46098 478 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC35A1P78382 337 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 HPCAP84074 193 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 EGR4Q05215 589 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 CEACAM7Q14002 265 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 ETFDHQ16134 617 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 HHATQ5VTY9 493 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 PAQR6Q6TCH4 344 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR52P1PQ8NH57 321 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 TLCD1Q96CP7 247 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 DDIT4LQ96D03 193 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 TPT1P8Q9HAU6 139 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC17A5Q9NRA2 495 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 SDR39U1Q9NRG7 319 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 SEC14L4Q9UDX3 406 aa11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF443Q9Y2A4 671 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-241ENST00000626948 AQP7P3A6NL99 342 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 TMEM229AB2RXF0 380 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 M0R1B8 84 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 FRS3O43559 492 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SLC22A3O75751 556 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 LY6HO94772 140 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 PTAFRP25105 342 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 FKBP2P26885 142 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 PPP2R2BQ00005 443 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 HOXC5Q00444 222 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 OR7A5Q15622 319 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 MST1LQ2TV78 715 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 OTUD3Q5T2D3 398 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SLC22A25Q6T423 547 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 TMEM108Q6UXF1 575 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SERPINA11Q86U17 422 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 KIRREL3Q8IZU9 778 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 TRIML2Q8N7C3 387 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 OR9K2Q8NGE7 335 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 NANOS1Q8WY41 292 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 GTF2H4Q92759 462 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 C3orf49Q96BT1 292 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 TMEM19Q96HH6 336 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 DHRS9Q9BPW9 319 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 PAIP1Q9H074 479 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 NELFAQ9H3P2 528 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SLC52A3Q9NQ40 469 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 CBLN4Q9NTU7 201 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SLAMF8Q9P0V8 285 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
SOX2-OT-241ENST00000626948 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms