RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PGCP20142 388 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 FGF9P31371 208 aaPredicted RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 LONP1P36776 959 aaKnown RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 NSUN5P1Q3KNT7 163 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 KLF17Q5JT82 389 aaPredicted RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 C1orf100Q5SVJ3 147 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 RFLNAQ6ZTI6 216 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 COX15Q7KZN9 410 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 RALGPS2Q86X27 583 aaPredicted RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 ATP6V0D2Q8N8Y2 350 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 BRSK1Q8TDC3 778 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 HIST1H4GQ99525 98 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 PELOQ9BRX2 385 aaKnown RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 RHBGQ9H310 441 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 SMYD3Q9H7B4 428 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 CALHM2Q9HA72 323 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 V9GY05 133 aa1.96□□□□□ -2.1
VBP1-204ENST00000625964 CEP170BQ9Y4F5 1589 aaPredicted RBP1.96□□□□□ -2.1
VBP1-204ENST00000625964 PLEKHH1Q9ULM0 1364 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 FGD6Q6ZV73 1430 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 MED14O60244 1454 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 LRP6O75581 1613 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 IGHV3-64DA0A0J9YX35 117 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 A6NIZ1 184 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 PRPSAP2O60256 369 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 LRATO95237 230 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 MAGP20916 626 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 MAPK3P27361 379 aaPredicted RBP1.95□□□□□ -2.1
VBP1-204ENST00000625964 YWHABP31946 246 aaKnown RBP1.95□□□□□ -2.1
VBP1-204ENST00000625964 HPCAL1P37235 193 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 PLA2G16P53816 162 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 RAP1BP61224 184 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 PDZK1IP1Q13113 114 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 MADCAM1Q13477 382 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 CNSTQ6PJW8 725 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 DEFB132Q7Z7B7 95 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 ACOT1Q86TX2 421 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 DHRSXQ8N5I4 330 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 OR6X1Q8NH79 312 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 MRPS31Q92665 395 aaKnown RBP1.95□□□□□ -2.1
VBP1-204ENST00000625964 ARPC1AQ92747 370 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 SLC35A5Q9BS91 424 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 HDHD3Q9BSH5 251 aaPredicted RBP1.95□□□□□ -2.1
VBP1-204ENST00000625964 NUDT15Q9NV35 164 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 AATFQ9NY61 560 aaKnown RBP eCLIP1.95□□□□□ -2.1
VBP1-204ENST00000625964 GNG12Q9UBI6 72 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 PHF11Q9UIL8 331 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 ERVW-1Q9UQF0 538 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 TRAF3IP3Q9Y228 551 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 CLSPNQ9HAW4 1339 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 TMEM94Q12767 1356 aa1.95□□□□□ -2.1
VBP1-204ENST00000625964 ZNF518AQ6AHZ1 1483 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 MLH3Q9UHC1 1453 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 CDK13Q14004 1512 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 NEURL4Q96JN8 1562 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 REREQ9P2R6 1566 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 RNF17Q9BXT8 1623 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 A0A096LNJ9 63 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 A0A1W2PQ67 120 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 E9PBE3 544 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 DLGAP1O14490 977 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 PLEKP08567 350 aaPredicted RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 H2BFMP0C1H6 154 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 CHTF8P0CG12 524 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 CALCBP10092 127 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 ICAM2P13598 275 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 ADRB3P13945 408 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 CRISP2P16562 243 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 SHMT2P34897 504 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 DAP3P51398 398 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 KPNA2P52292 529 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 AP3M2P53677 418 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 EIF4EBP1Q13541 118 aaPredicted RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 OR52W1Q6IF63 320 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 C11orf71Q6IPW1 123 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 TMIGD1Q6UXZ0 262 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 LRRC31Q6UY01 552 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 ZNF571Q7Z3V5 609 aaPredicted RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 MFSD6LQ8IWD5 586 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 FTMTQ8N4E7 242 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 ZNF561Q8N587 486 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 STXBP6Q8NFX7 210 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 OR10A7Q8NGE5 316 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 OR9G1Q8NH87 305 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 KIR2DL5BQ8NHK3 375 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 NDRG1Q92597 394 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 NAT9Q9BTE0 207 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 SELENOIQ9C0D9 397 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 NECAP2Q9NVZ3 263 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 ODF2LQ9ULJ1 636 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 BLMP54132 1417 aaPredicted RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 ATP10DQ9P241 1426 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 KDM5DQ9BY66 1539 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 CFAP74Q9C0B2 1584 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 LRP5O75197 1615 aa1.94□□□□□ -2.1
VBP1-204ENST00000625964 DNMT1P26358 1616 aaKnown RBP1.94□□□□□ -2.1
VBP1-204ENST00000625964 IGLV4-60A0A075B6I1 120 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 IGHV1OR21-1A0A087WYE8 117 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 A0A087WZY1 265 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 A0A1B0GUS0 222 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms