RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ANXA4P09525 319 aaPredicted RBP11.92□□□□□ -0.5
SNX1-214ENST00000625244 HSD3B1P14060 373 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ATP5F1P24539 256 aaPredicted RBP11.92□□□□□ -0.5
SNX1-214ENST00000625244 HSD3B2P26439 372 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 CDH13P55290 713 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ACSM2AQ08AH3 577 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 HSPB3Q12988 150 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 TBRG1Q3YBR2 411 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 SYT14P1Q58G82 188 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ACSM2BQ68CK6 577 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 FAM71E1Q6IPT2 247 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
SNX1-214ENST00000625244 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 SLC25A28Q96A46 364 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
SNX1-214ENST00000625244 OBP2BQ9NPH6 170 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 MKS1Q9NXB0 559 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 MMP24Q9Y5R2 645 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 FLVCR1Q9Y5Y0 555 aa11.92□□□□□ -0.5
SNX1-214ENST00000625244 ARHGAP32A7KAX9 2087 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 GTPBP1O00178 669 aaKnown RBP11.91□□□□□ -0.5
SNX1-214ENST00000625244 DEAF1O75398 565 aaPredicted RBP11.91□□□□□ -0.5
SNX1-214ENST00000625244 OR4F21O95013 312 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 IFI6P09912 130 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 ASMTP46597 345 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 SERPINB4P48594 390 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 NAA20P61599 178 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 POU3F1Q03052 451 aaPredicted RBP11.91□□□□□ -0.5
SNX1-214ENST00000625244 BTKQ06187 659 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 LSRQ86X29 649 aaPredicted RBP11.91□□□□□ -0.5
SNX1-214ENST00000625244 COX18Q8N8Q8 333 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 UBE2FQ969M7 185 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 CITED1Q99966 193 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
SNX1-214ENST00000625244 MIEF1Q9NQG6 463 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 REV1Q9UBZ9 1251 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
SNX1-214ENST00000625244 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 A8MT66 165 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 PLIN3O60664 434 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 RP2O75695 350 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 KNG1P01042 644 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 PRB2P02812 416 aaPredicted RBP11.9□□□□□ -0.5
SNX1-214ENST00000625244 PROCP04070 461 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 RPS17P08708 135 aaKnown RBP11.9□□□□□ -0.5
SNX1-214ENST00000625244 TFPIP10646 304 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 CPA3P15088 417 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 H2AFXP16104 143 aaPredicted RBP11.9□□□□□ -0.5
SNX1-214ENST00000625244 PCGF2P35227 344 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 MAGEA8P43361 318 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 HTR6P50406 440 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 CCR4P51679 360 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 CBFBQ13951 182 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 CFAP157Q5JU67 520 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 ZYG11AQ6WRX3 759 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 SZRD1Q7Z422 152 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 TMCO5AQ8N6Q1 288 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 OR1K1Q8NGR3 316 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 ZNF483Q8TF39 744 aaPredicted RBP11.9□□□□□ -0.5
SNX1-214ENST00000625244 ZHX1-C8orf76Q96EF9 292 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 ARL5BQ96KC2 179 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 SERINC1Q9NRX5 453 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 SLC9A8Q9Y2E8 581 aa11.9□□□□□ -0.5
SNX1-214ENST00000625244 H3BNH8 94 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 CLDN34H7C241 214 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 PIP5K1BO14986 540 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SCAMP2O15127 329 aaKnown RBP11.89□□□□□ -0.51
SNX1-214ENST00000625244 SYNGR3O43761 229 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SPAG7O75391 227 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SKAP2O75563 359 aaPredicted RBP11.89□□□□□ -0.51
SNX1-214ENST00000625244 NCR1O76036 304 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SUPT7LO94864 414 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 PMS2P2O95744 297 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 LGI1O95970 557 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 ALOX5P09917 674 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 GPC1P35052 558 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 GSTM5P46439 218 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SEC24CP53992 1094 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 SESN3P58005 492 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
SNX1-214ENST00000625244 POU6F2P78424 691 aaPredicted RBP11.89□□□□□ -0.51
SNX1-214ENST00000625244 MERTKQ12866 999 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
SNX1-214ENST00000625244 AVPI1Q5T686 147 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 ASPHD2Q6ICH7 369 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 JADE3Q92613 823 aa11.89□□□□□ -0.51
SNX1-214ENST00000625244 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms