RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 MST1LQ2TV78 715 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 LIPNQ5VXI9 398 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 SLC46A3Q7Z3Q1 461 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 SPATA19Q7Z5L4 167 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 ANKS4BQ8N8V4 417 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 FAM71CQ8NEG0 241 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 ROPN1LQ96C74 230 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 ZG16BQ96DA0 208 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 PKNOX2Q96KN3 472 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 KCNS3Q9BQ31 491 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 SSU72Q9NP77 194 aaKnown RBP14.15□□□□□ -0.14
CD99-211ENST00000623253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.15□□□□□ -0.14
CD99-211ENST00000623253 ASIC5Q9NY37 505 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.15□□□□□ -0.14
CD99-211ENST00000623253 TRAPPC4Q9Y296 219 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 TMED7Q9Y3B3 224 aa14.15□□□□□ -0.14
CD99-211ENST00000623253 V9GYY5 206 aaPredicted RBP14.15□□□□□ -0.14
CD99-211ENST00000623253 IGHV4-61A0A0C4DH41 118 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 WDR91A4D1P6 747 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 BIRC5O15392 142 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 KRT33AO76009 404 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 SNUPNO95149 360 aaKnown RBP14.14□□□□□ -0.15
CD99-211ENST00000623253 IMPDH2P12268 514 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 MPGP29372 298 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 SERPINF1P36955 418 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 HTR3AP46098 478 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 ABCE1P61221 599 aaKnown RBP14.14□□□□□ -0.15
CD99-211ENST00000623253 HPCAP84074 193 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 H3F3AP84243 136 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 SQLEQ14534 574 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 CHI3L2Q15782 390 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 PDCD2Q16342 344 aaPredicted RBP14.14□□□□□ -0.15
CD99-211ENST00000623253 GPAT3Q53EU6 434 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 VHLLQ6RSH7 139 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 AAED1Q7RTV5 226 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 ANKRD46Q86W74 232 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 DDIT4LQ96D03 193 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 PPP1R36Q96LQ0 422 aa14.14□□□□□ -0.15
CD99-211ENST00000623253 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
CD99-211ENST00000623253 LOC390937A0A1W2PQ73 354 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 TMEM72A0PK05 275 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 AP3D1O14617 1153 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 TM9SF1O15321 606 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 ITM2AO43736 263 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 MYZAPP0CAP1 466 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 TACR3P29371 465 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 SLC17A1Q14916 467 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 FRRS1Q6ZNA5 592 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 KIRREL3Q8IZU9 778 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 ZNF781Q8N8C0 355 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 CNOT9Q92600 299 aaKnown RBP14.13□□□□□ -0.15
CD99-211ENST00000623253 PMM1Q92871 262 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 PARD6BQ9BYG5 372 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
CD99-211ENST00000623253 POLE3Q9NRF9 147 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 OSGIN1Q9UJX0 560 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.13□□□□□ -0.15
CD99-211ENST00000623253 RAP2CQ9Y3L5 183 aa14.13□□□□□ -0.15
CD99-211ENST00000623253 RNASET2O00584 256 aaKnown RBP14.12□□□□□ -0.15
CD99-211ENST00000623253 UQCRC2P22695 453 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 CHI3L1P36222 383 aaPredicted RBP14.12□□□□□ -0.15
CD99-211ENST00000623253 POLR2HP52434 150 aaKnown RBP14.12□□□□□ -0.15
CD99-211ENST00000623253 FUT5Q11128 374 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 CR1LQ2VPA4 569 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 OTUD3Q5T2D3 398 aaPredicted RBP14.12□□□□□ -0.15
CD99-211ENST00000623253 GPAT4Q86UL3 456 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 MIPOL1Q8TD10 442 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 OIT3Q8WWZ8 545 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 AURKBQ96GD4 344 aaPredicted RBP14.12□□□□□ -0.15
CD99-211ENST00000623253 BPESC1Q9GZL8 116 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 SAP130Q9H0E3 1048 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 AKTIPQ9H8T0 292 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 TMEM45AQ9NWC5 275 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 PLCE1Q9P212 2302 aa14.12□□□□□ -0.15
CD99-211ENST00000623253 IGHV1-18A0A0C4DH31 117 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 ZC3H12DA2A288 527 aaKnown RBP14.11□□□□□ -0.15
CD99-211ENST00000623253 LRP5LA4QPB2 252 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 ZNF208O43345 1280 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 SCN2BO60939 215 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 AKR7A3O95154 331 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 CRYAAP02489 173 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 GUSBP08236 651 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 ZNF23P17027 643 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 SLC1A6P48664 564 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 KHKP50053 298 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 RPL14P50914 215 aaKnown RBP14.11□□□□□ -0.15
CD99-211ENST00000623253 CEACAM7Q14002 265 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 PAQR6Q6TCH4 344 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 TMEM99Q8N816 258 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 POMGNT2Q8NAT1 580 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 ZNF540Q8NDQ6 660 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 VPS37AQ8NEZ2 397 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 OR9K2Q8NGE7 335 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 OR8J2Q8NGG1 315 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 ZNF385AQ96PM9 386 aaKnown RBP14.11□□□□□ -0.15
CD99-211ENST00000623253 SLC38A2Q96QD8 506 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 DPY30Q9C005 99 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 CENPHQ9H3R5 247 aa14.11□□□□□ -0.15
CD99-211ENST00000623253 MYOZ1Q9NP98 299 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms