RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 AVPR2P30518 371 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ACTA2P62736 377 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ACTG2P63267 376 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 GALEQ14376 348 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 KLHL12Q53G59 568 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 PLA2G2CQ5R387 149 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SLC35F1Q5T1Q4 408 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 DCAF12Q5T6F0 453 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 C16orf87Q6PH81 154 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ZNF517Q6ZMY9 492 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 SHISA6Q6ZSJ9 500 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 MAMDC2Q7Z304 686 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 NANOGNBQ7Z5D8 188 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 MARCH3Q86UD3 253 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 C10orf53Q8N6V4 93 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 GALNT6Q8NCL4 622 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR51G2Q8NGK0 314 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR5M3Q8NGP4 307 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR2I1PQ8NGU4 316 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 RNF138Q8WVD3 245 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 PTP4A1Q93096 173 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 NACC2Q96BF6 587 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 WDR77Q9BQA1 342 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 MED18Q9BUE0 208 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ARRDC1-AS1Q9H2J1 176 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SLC39A1Q9NY26 324 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 TAS2R10Q9NYW0 307 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 A0A075B6Q4 140 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 METTL15A6NJ78 407 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 TRIM3O75382 744 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 MT-ND5P03915 603 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ADRA2AP08913 450 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SBK2P0C263 348 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR2T7P0C7T2 308 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 CD40LGP29965 261 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SDHAP31040 664 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 APOBEC1P41238 236 aaKnown RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 CRYBB2P43320 205 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 RORCP51449 518 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SLC25A1P53007 311 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 RUNX1T1Q06455 604 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 CRMP1Q14194 572 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ALG10Q5BKT4 473 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ZNF362Q5T0B9 420 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 ZNF322Q6U7Q0 402 aaPredicted RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 JAZF1Q86VZ6 243 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ZNF485Q8NCK3 441 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR52E2Q8NGJ4 325 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 OR2T27Q8NH04 317 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 KCTD7Q96MP8 289 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SNX18Q96RF0 628 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 CENPOQ9BU64 300 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 DEFB126Q9BYW3 111 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ULBP3Q9BZM4 244 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 KCNN2Q9H2S1 579 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 APMAPQ9HDC9 416 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 EXOSC4Q9NPD3 245 aaKnown RBP14.9□□□□□ -0.02
LDB3-208ENST00000623007 MYOTQ9UBF9 498 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 POLHQ9Y253 713 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 IER3IP1Q9Y5U9 82 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SEC16AO15027 2179 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 TRDV1A0A1B0GX56 115 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 A0A1W2PQ72 361 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 FAM183AA6NL82 134 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 C12orf71A8MTZ7 269 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 SOCS6O14544 535 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 TP53I11O14683 189 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 SOX3P41225 446 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 SLC16A1P53985 500 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 ZNF45Q02386 682 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 SNTA1Q13424 505 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 QPRTQ15274 297 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 FAM69AQ5T7M9 428 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 LIPKQ5VXJ0 399 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 TMEM81Q6P7N7 255 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 CD200R1LQ6Q8B3 271 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 OR4F15Q8NGB8 312 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 OR2Y1Q8NGV0 311 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 M1APQ8TC57 530 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 GPR119Q8TDV5 335 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 MR1Q95460 341 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 CNN2Q99439 309 aaKnown RBP14.89□□□□□ -0.03
LDB3-208ENST00000623007 MNTQ99583 582 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 ENKD1Q9H0I2 346 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 AKIP1Q9NQ31 210 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 BABAM2Q9NXR7 383 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
LDB3-208ENST00000623007 IGLV3-32A0A0A0MS00 114 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 CCDC182A6NF36 153 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 MCIDASD6RGH6 385 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 GNB5O14775 395 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 GPX5O75715 221 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 FBXO45P0C2W1 286 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 ICAM2P13598 275 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 PTNP21246 168 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 F8A1P23610 371 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 UQCRC1P31930 480 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 BLVRAP53004 296 aa14.88□□□□□ -0.03
LDB3-208ENST00000623007 MRPL28Q13084 256 aaKnown RBP14.88□□□□□ -0.03
LDB3-208ENST00000623007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms