RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

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Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FAM87AP0C7U9 286 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 SAGP10523 405 aaPredicted RBP16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 TFPIP10646 304 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 GSTM3P21266 225 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 ELK4P28324 431 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 RPS5P46782 204 aaKnown RBP16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 MAP2K6P52564 334 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 C1orf140Q5VVS0 124 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 C5orf46Q6UWT4 87 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 TMPRSS11FQ6ZWK6 438 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 DNAJA3Q96EY1 480 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 CNBD2Q96M20 576 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 SFXN2Q96NB2 322 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 RDH12Q96NR8 316 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 UNC119BA6NIH7 251 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 CDC42EP2O14613 210 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 NPIPB7O75200 414 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 AHSA1O95433 338 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 OPN1LWP04000 364 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 CELA3AP09093 270 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 FUT1P19526 365 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 B3GALT5-AS1P59052 145 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 COX10Q12887 443 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 LINC00303Q3SY05 128 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 SYT14P1Q58G82 188 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 CD300LDQ6UXZ3 194 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 PARP8Q8N3A8 854 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 FAM109AQ8N4B1 249 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC25A43Q8WUT9 341 aaPredicted RBP16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 TAAR8Q969N4 342 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 MYCBPQ99417 103 aaPredicted RBP16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 FAM192AQ9GZU8 254 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 QPCTLQ9NXS2 382 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 ENOPH1Q9UHY7 261 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 B3GNT3Q9Y2A9 372 aa16.08■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF407Q9C0G0 2248 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 HTR3EA5X5Y0 456 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 LRRN3E7EW58 273 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 OR7A10O76100 309 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 TNFAIP8O95379 198 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 SOX14O95416 240 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 IGF2P01344 180 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF74Q16587 644 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 RNFT1Q5M7Z0 435 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 OR13C2Q8NGS9 318 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 C9orf43Q8TAL5 461 aaPredicted RBP16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 CYGBQ8WWM9 190 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 MBOAT4Q96T53 435 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF71Q9NQZ8 489 aaPredicted RBP16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 REV1Q9UBZ9 1251 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF337Q9Y3M9 751 aa16.07■□□□□ 0.16
PTCHD3-202ENST00000622555 OSMP13725 252 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF24P17028 368 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 FKBP2P26885 142 aaKnown RBP16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 SFTPDP35247 375 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC10A1Q14973 349 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC36A3Q495N2 470 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 FOXB2Q5VYV0 432 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC46A3Q7Z3Q1 461 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 DHRSXQ8N5I4 330 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 SMPDL3BQ92485 455 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 ARL5BQ96KC2 179 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 MOGAT1Q96PD6 335 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 ADI1Q9BV57 179 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 PTDSS2Q9BVG9 487 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 GABARAPL3Q9BY60 117 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 PRORYQ9H606 182 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 ZMIZ1Q9ULJ6 1067 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 DNAJC13O75165 2243 aa16.06■□□□□ 0.16
PTCHD3-202ENST00000622555 H3BN98 237 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 TFECO14948 347 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 BGLAPP02818 100 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 POU1F1P28069 291 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 SHC1P29353 583 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 POLR2IP36954 125 aaKnown RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 NPRL3Q12980 569 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 TMEM176BQ3YBM2 270 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 FAM69AQ5T7M9 428 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 RASSF6Q6ZTQ3 369 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 OAFQ86UD1 273 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 LRRC17Q8N6Y2 441 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 ZNF555Q8NEP9 628 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC25A36Q96CQ1 311 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 OR5B2Q96R09 309 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 POTEKPQ9BYX7 375 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 DEFB127Q9H1M4 99 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC6A15Q9H2J7 730 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 NANSQ9NR45 359 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 SLC6A5Q9Y345 797 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 ACACBO00763 2458 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 TRAV27A0A087WT01 109 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 OR2T1O43869 369 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 IGFBP1P08833 259 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 MYF6P23409 242 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 IDUAP35475 653 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 ESRRGP62508 458 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 RAC1P63000 192 aa16.05■□□□□ 0.16
PTCHD3-202ENST00000622555 LTBQ06643 244 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms