RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RCBTB1Q8NDN9 531 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SDR9C7Q8NEX9 313 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 OR13H1Q8NG92 308 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 OR6C4Q8NGE1 309 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 OR13C5Q8NGS8 318 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 OR9A4Q8NGU2 314 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 OR4K13Q8NH42 304 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SMAP2Q8WU79 429 aaPredicted RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 LIPHQ8WWY8 451 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 RIT1Q92963 219 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 MRPL38Q96DV4 380 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 GPR137Q96N19 417 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 CCDC3Q9BQI4 270 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 PBX4Q9BYU1 374 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 FAM60AQ9NP50 221 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 GPR27Q9NS67 375 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 WDR70Q9NW82 654 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 EMC3Q9P0I2 261 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 MRPS33Q9Y291 106 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SLC6A5Q9Y345 797 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF337Q9Y3M9 751 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 CLDN16Q9Y5I7 305 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 TMEM131Q92545 1883 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ARHGEF17Q96PE2 2063 aaPredicted RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 GOLGA4Q13439 2230 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 KIAA0100Q14667 2235 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 NUP210LQ5VU65 1888 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 TEX13CA0A0J9YWL9 993 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF879B4DU55 563 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 PRAMEF26H0Y7S4 382 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 AKR7A2O43488 359 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 HCRTR1O43613 425 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SULT1B1O43704 296 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SRPX2O60687 465 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ITGA10O75578 1167 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 TPPPO94811 219 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 GLCEO94923 617 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SEMA4FO95754 770 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 APEHP13798 732 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ST6GAL1P15907 406 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SPI1P17947 270 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 GABRG2P18507 467 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 EN2P19622 333 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 EDNRAP25101 427 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 STOMP27105 288 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ADH7P40394 386 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 PBX2P40425 430 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 GPR3P46089 330 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 HCCSP53701 268 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SKP1P63208 163 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 DGCR2P98153 550 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 RIPPLY1Q0D2K3 151 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 FUT7Q11130 342 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 IKZF1Q13422 519 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 CLPPQ16740 277 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 FNDC7Q5VTL7 733 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 FAM205BPQ63HN1 556 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SLC22A10Q63ZE4 541 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SLC6A19Q695T7 634 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 LYPD4Q6UWN0 246 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 TMEM92Q6UXU6 159 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF782Q6ZMW2 699 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 LSRQ86X29 649 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SLC22A18ASQ8N1D0 253 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 CADM2Q8N3J6 435 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 TOMM5Q8N4H5 51 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 RFLNBQ8N5W9 214 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF614Q8N883 585 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 BCORP1Q8N888 145 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 EXD3Q8N9H8 876 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 DTX3Q8N9I9 347 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 C19orf47Q8N9M1 422 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 LRRC75AQ8NAA5 344 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 FAM71CQ8NEG0 241 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 OR4N2Q8NGD1 307 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 OR4D9Q8NGE8 314 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SMIM4Q8WVI0 70 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 HSD17B8Q92506 261 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 RBM18Q96H35 190 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SPACA7Q96KW9 195 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF285Q96NJ3 590 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 GFM1Q96RP9 751 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 PELOQ9BRX2 385 aaKnown RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 MRI1Q9BV20 369 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 CACNG6Q9BXT2 260 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 NDEL1Q9GZM8 345 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 ACTR6Q9GZN1 396 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 NKX2-4Q9H2Z4 354 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 OR51J1Q9H342 316 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 TCEAL2Q9H3H9 227 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 RANBP3Q9H6Z4 567 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 C8orf33Q9H7E9 229 aaPredicted RBP8.81□□□□□ -1
IGHV3-54-201ENST00000622166 Q9N2J8 555 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 KLHL1Q9NR64 748 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 PRTFDC1Q9NRG1 225 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 STARD5Q9NSY2 213 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 SLCO1C1Q9NYB5 712 aa8.81□□□□□ -1
IGHV3-54-201ENST00000622166 STMN3Q9NZ72 180 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms