RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 AGR2O95994 175 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 TBXA2RP21731 343 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 LIMS1P48059 325 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 SOX2P48431 317 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 OR12D2P58182 307 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 CXCR4P61073 352 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 LTBQ06643 244 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 FMODQ06828 376 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 TSPAN31Q12999 210 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ILKQ13418 452 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ISXQ2M1V0 245 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 ZNF620Q6ZNG0 422 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ERI1Q8IV48 349 aaKnown RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 ZNF527Q8NB42 609 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ZSCAN1Q8NBB4 408 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 POGLUT1Q8NBL1 392 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 MIPOL1Q8TD10 442 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 THEM6Q8WUY1 208 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PTP4A1Q93096 173 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 TRMT61AQ96FX7 289 aaKnown RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 SH3GL3Q99963 347 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 MYOTQ9UBF9 498 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PSORS1C1Q9UIG5 152 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 KCND3Q9UK17 655 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 KALRNO60229 2985 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 TTC36A6NLP5 189 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 KDM4EB2RXH2 506 aaPredicted RBP9.58□□□□□ -0.88
VPS11-208ENST00000621676 C10orf142B7Z368 130 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 M0R082 166 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 ASNA1O43681 348 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 RAMP1O60894 148 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SNX4O95219 450 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 MT-CO3P00414 261 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 IGKV3-11P04433 115 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 UMODP07911 640 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SHC1P29353 583 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 FOLR3P41439 243 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 HMGA2P52926 109 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SLC26A5P58743 744 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 ITGADQ13349 1161 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 RBM48Q5RL73 367 aaKnown RBP9.58□□□□□ -0.88
VPS11-208ENST00000621676 ULK3Q6PHR2 472 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 OR11G2Q8NGC1 345 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 OR8J1Q8NGP2 316 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SGTBQ96EQ0 304 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 THOC3Q96J01 351 aaKnown RBP9.58□□□□□ -0.88
VPS11-208ENST00000621676 RASL10BQ96S79 203 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 STACQ99469 402 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 STMN3Q9NZ72 180 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 ARGFXA6NJG6 315 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 C9orf172C9J069 976 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 H0YJX3 145 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 HBQ1P09105 142 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 CCL11P51671 97 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 RUNX1T1Q06455 604 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 PGGHGQ32M88 737 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SSX6Q7RTT6 188 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 PM20D2Q8IYS1 436 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 PROKR2Q8NFJ6 384 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 OR4K17Q8NGC6 315 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 CT55Q8WUE5 264 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 MYDGFQ969H8 173 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 LGALS12Q96DT0 336 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 TXNDC15Q96J42 360 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 SEMA4CQ9C0C4 833 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 CSAG2Q9Y5P2 127 aa9.58□□□□□ -0.88
VPS11-208ENST00000621676 A0A0B4J2E0 115 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 A0A1B0GX12 115 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 DAPL1A0PJW8 107 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 SUSD5O60279 629 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 TRIM3O75382 744 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 KLF7O75840 302 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 FBXO45P0C2W1 286 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 GP1BBP13224 206 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 ACVR2AP27037 513 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 GTF2E2P29084 291 aaKnown RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 LGALS3BPQ08380 585 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 FOXF1Q12946 379 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 CAMK2DQ13557 499 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 KEAP1Q14145 624 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 NCF4Q15080 339 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 SPHARQ15513 63 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 LINC00346Q8IVM7 164 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 OR52I1Q8NGK6 324 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 SPRYD4Q8WW59 207 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 WDR77Q9BQA1 342 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 CENPMQ9NSP4 180 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 TAS2R10Q9NYW0 307 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 MRPS7Q9Y2R9 242 aaKnown RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 RIIAD1A6NNX1 92 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 NKX2-8O15522 239 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 NOVA1P51513 510 aaKnown RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 NFATC3Q12968 1075 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 TMEM164Q5U3C3 297 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 QSOX2Q6ZRP7 698 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 OR6N2Q8NGY6 317 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 ZNF417Q8TAU3 575 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms