RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GPIP06744 558 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 UROSP10746 265 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CASP9P55211 416 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 NME5P56597 212 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 C2orf80Q0P641 193 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ITGADQ13349 1161 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ZNF239Q16600 458 aaKnown RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 TMEM249Q2WGJ8 235 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 PLPPR5Q32ZL2 321 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 SLC36A3Q495N2 470 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GALNT18Q6P9A2 607 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CLEC2AQ6UVW9 174 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 DNM1P46Q6ZS02 220 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 Q6ZSR9 355 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GPRIN3Q6ZVF9 776 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 USP51Q70EK9 711 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 SZRD1Q7Z422 152 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TUSC5Q8IXB3 177 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CBR4Q8N4T8 237 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ZNF511Q8NB15 262 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 OR4C3Q8NH37 302 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 RNF128Q8TEB7 428 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 PIK3R3Q92569 461 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CPNE4Q96A23 557 aaPredicted RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 TUBGCP3Q96CW5 907 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ELP4Q96EB1 424 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 SH3YL1Q96HL8 342 aaPredicted RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 KLHL15Q96M94 604 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ZNF382Q96SR6 550 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 LMF2Q9BU23 707 aaKnown RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 POTEKPQ9BYX7 375 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TRIM15Q9C019 465 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GLIPR2Q9H4G4 154 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 C8orf4Q9NR00 106 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GID8Q9NWU2 228 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ETAA1Q9NY74 926 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 KLHL13Q9P2N7 655 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TIMM22Q9Y584 194 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GXYLT2A0PJZ3 443 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TTC36A6NLP5 189 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ANGPT2O15123 496 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 RAMP1O60894 148 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 PRSS23O95084 383 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 OXSR1O95747 527 aaPredicted RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 IGKV1D-16P01601 117 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CD8AP01732 235 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 THBS1P07996 1170 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 GNAO1P09471 354 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 PTNP21246 168 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 HTR6P50406 440 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CDH11P55287 796 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 C21orf58P58505 322 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 UFM1P61960 85 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 EMX2Q04743 252 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 HSPB3Q12988 150 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 KIAA0040Q15053 153 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 P2RY6Q15077 328 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 KRTAP24-1Q3LI83 254 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 RABL3Q5HYI8 236 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 C6orf136Q5SQH8 315 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CPTPQ5TA50 214 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 DHRS4L2Q6PKH6 230 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 DLEU7Q6UYE1 221 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 DNAJC14Q6Y2X3 702 aaPredicted RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 RIMKLAQ8IXN7 391 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 DDIASQ8IXT1 998 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 MUCL1Q96DR8 90 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 ADAD1Q96M93 576 aaKnown RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 AMDHD1Q96NU7 426 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TNFRSF13CQ96RJ3 184 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 TRAF4Q9BUZ4 470 aaPredicted RBP6.94□□□□□ -1.3
CLK1-215ENST00000621181 SHARPINQ9H0F6 387 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 SLAMF8Q9P0V8 285 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 CCL27Q9Y4X3 112 aa6.94□□□□□ -1.3
CLK1-215ENST00000621181 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 DPRXA6NFQ7 191 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 SAC3D1A6NKF1 404 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 LCE2BO14633 110 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 ABCD4O14678 606 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 TRMUO75648 421 aaKnown RBP6.93□□□□□ -1.3
CLK1-215ENST00000621181 LYZL6O75951 148 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 NUDT14O95848 222 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 NPPAP01160 153 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 UMPSP11172 480 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 FASP25445 335 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 PSMA4P25789 261 aaKnown RBP6.93□□□□□ -1.3
CLK1-215ENST00000621181 GPC1P35052 558 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 EIF1P41567 113 aaKnown RBP6.93□□□□□ -1.3
CLK1-215ENST00000621181 PRKAG1P54619 331 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 VLDLRP98155 873 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 LIPEQ05469 1076 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 PPA1Q15181 289 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 RAB35Q15286 201 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 IMPG1Q17R60 797 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 PRSS53Q2L4Q9 553 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 CYBRD1Q53TN4 286 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms