RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SORBS2O94875 1100 aaKnown RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 RAB3DO95716 219 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 GLULP15104 373 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TAS2R31P59538 309 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 NKAIN1Q4KMZ8 207 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TRAPPC2LQ9UL33 140 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 IGLV3-10A0A075B6K4 115 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TNFSF12O43508 249 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CSF1P09603 554 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CRHBPP24387 322 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 AGTR1P30556 359 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CX3CR1P49238 355 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 PLAG1Q6DJT9 500 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 RTL6Q6ICC9 239 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF813Q6ZN06 617 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 SNAPC3Q92966 411 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 SNX18Q96RF0 628 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 GORASP2Q9H8Y8 452 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ZFP57Q9NU63 452 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TAS2R3Q9NYW6 316 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 MYH10P35580 1976 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ANKRD36CQ5JPF3 1778 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TMEM202A6NGA9 273 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 SLCO2B1O94956 709 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ABHD16AO95870 558 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ARAFP10398 606 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 NCS1P62166 190 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 IKZF1Q13422 519 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 YOD1Q5VVQ6 348 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CHDHQ8NE62 594 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 NDNFQ8TB73 568 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 BCL7CQ8WUZ0 217 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF649Q9BS31 505 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 KATNB1Q9BVA0 655 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 PCP4L1A6NKN8 68 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF736B4DX44 427 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 I3L521 148 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TOR1AO14656 332 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 KIR2DL3P43628 341 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CDK5R2Q13319 367 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 BCL2A1Q16548 175 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 NPSR1Q6W5P4 371 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 RNF113BQ8IZP6 322 aaKnown RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 INPP5EQ9NRR6 644 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 UBQLN2Q9UHD9 624 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 YARS2Q9Y2Z4 477 aaKnown RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 A0A1W2PQL4 384 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 AQP2P41181 271 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 NOVA1P51513 510 aaKnown RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CAV3P56539 151 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 MYBPHQ13203 477 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 METRNLQ641Q3 311 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 RPS19BP1Q86WX3 136 aaKnown RBP10.56□□□□□ -0.72
CLIP1-219ENST00000620786 SPEM1Q8N4L4 309 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 OR5B12Q96R08 314 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 CACNG6Q9BXT2 260 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 TXLNGYQ9BZA5 131 aa10.56□□□□□ -0.72
CLIP1-219ENST00000620786 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 FURINP09958 794 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 DHRS4L1P0CG22 281 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 PRKACBP22694 351 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 OPRD1P41143 372 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 MS4A2Q01362 244 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SERPINA12Q8IW75 414 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 OR56B2PQ8NGI1 322 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 MRGPRX1Q96LB2 322 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 CCDC74BQ96LY2 380 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 LTB4R2Q9NPC1 389 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 NHSQ6T4R5 1651 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 CXCL10P02778 98 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 DNASE1P24855 282 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 LGALS4P56470 323 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SF3A2Q15428 464 aaKnown RBP10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SLC48A1Q6P1K1 146 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 ACBD4Q8NC06 268 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF740Q8NDX6 193 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 TRIB1Q96RU8 372 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 VRK1Q99986 396 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-219ENST00000620786 MRI1Q9BV20 369 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 LHPPQ9H008 270 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 FUOMA2VDF0 154 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 KRBA1A5PL33 1030 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF705EA8MWA4 302 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-219ENST00000620786 B4GAT1O43505 415 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 STK17BO94768 372 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 MTCP1P56278 107 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 TAS2R20P59543 309 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 GPR176Q14439 515 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 KCTD11Q693B1 232 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SLC35F3Q8IY50 421 aa10.55□□□□□ -0.72
CLIP1-219ENST00000620786 SIMC1Q8NDZ2 872 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms