RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	MFRP	Q9BY79	579 aa		27.58	■■■□□ 2.01
KHSRP-213	ENST00000619396	CAPN10	Q9HC96	672 aa		27.58	■■■□□ 2.01
KHSRP-213	ENST00000619396	RDH16	O75452	317 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	GDI2	P50395	445 aa	Known RBP	27.57	■■■□□ 2
KHSRP-213	ENST00000619396	C19orf57	Q0VDD7	668 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	SIAH3	Q8IW03	269 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	SDR9C7	Q8NEX9	313 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	OR4K13	Q8NH42	304 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	TPSD1	Q9BZJ3	242 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	SLCO1C1	Q9NYB5	712 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	SPEG	Q15772	3267 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	OR2T7	P0C7T2	308 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	SLC35E2	P0CK97	266 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	DGCR2	P98153	550 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	GGTLC2	Q14390	218 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	TOMM5	Q8N4H5	51 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	OR4N2	Q8NGD1	307 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	OR2T27	Q8NH04	317 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	LMF2	Q9BU23	707 aa	Known RBP	27.57	■■■□□ 2
KHSRP-213	ENST00000619396	IRF2BPL	Q9H1B7	796 aa		27.57	■■■□□ 2
KHSRP-213	ENST00000619396	KIR2DS5	A0A0G2JLQ3	304 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396		A0A0G2JNG1	304 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	OR5K3	A6NET4	321 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	KIR2DS3	K7RE56	304 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	GUSB	P08236	651 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	UCHL1	P09936	223 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	KIR2DS5	Q14953	304 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	ZNF655	Q8N720	491 aa	Predicted RBP	27.56	■■■□□ 2
KHSRP-213	ENST00000619396	OR9A4	Q8NGU2	314 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	LRFN5	Q96NI6	719 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	CCDC3	Q9BQI4	270 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	MRPL39	Q9NYK5	338 aa	Known RBP	27.56	■■■□□ 2
KHSRP-213	ENST00000619396	CLEC4A	Q9UMR7	237 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	SIRPA	P78324	504 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	CDON	Q4KMG0	1287 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	LRRC17	Q8N6Y2	441 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	FAM98A	Q8NCA5	519 aa	Known RBP	27.56	■■■□□ 2
KHSRP-213	ENST00000619396	CCDC86	Q9H6F5	360 aa	Known RBP	27.56	■■■□□ 2
KHSRP-213	ENST00000619396	EMC7	Q9NPA0	242 aa		27.56	■■■□□ 2
KHSRP-213	ENST00000619396	IGFBP4	P22692	258 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	STOM	P27105	288 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	CCR5	P51681	352 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	GBX2	P52951	348 aa	Predicted RBP	27.55	■■■□□ 2
KHSRP-213	ENST00000619396	RAB38	P57729	211 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	PITPNA	Q00169	270 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	CAMK2B	Q13554	666 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	POMGNT2	Q8NAT1	580 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	ZDHHC1	Q8WTX9	485 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	CNN2	Q99439	309 aa	Known RBP	27.55	■■■□□ 2
KHSRP-213	ENST00000619396	WSB2	Q9NYS7	404 aa	Predicted RBP	27.55	■■■□□ 2
KHSRP-213	ENST00000619396	SLC23A1	Q9UHI7	598 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	VCAN	P13611	3396 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	FLRT2	O43155	660 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	NDUFB2	O95178	105 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	CD1A	P06126	327 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	MAZ	P56270	477 aa	Known RBP	27.55	■■■□□ 2
KHSRP-213	ENST00000619396	ACTA2	P62736	377 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	ACTG2	P63267	376 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	AVL9	Q8NBF6	648 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	OR51L1	Q8NGJ5	315 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	ZFP64	Q9NPA5	681 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	CAMK2A	Q9UQM7	478 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	IER3IP1	Q9Y5U9	82 aa		27.55	■■■□□ 2
KHSRP-213	ENST00000619396	TEX13C	A0A0J9YWL9	993 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	TNFRSF10A	O00220	468 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	ARL6IP5	O75915	188 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	GIF	P27352	417 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	KIRREL2	Q6UWL6	708 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	OVCH1	Q7RTY7	1134 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	OOSP2	Q86WS3	158 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	SLC35F2	Q8IXU6	374 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	ZNRF4	Q8WWF5	429 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	PHF21A	Q96BD5	680 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	ZFP3	Q96NJ6	502 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	OR2M2	Q96R28	347 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	ORAI3	Q9BRQ5	295 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	BRD7	Q9NPI1	651 aa		27.54	■■■□□ 2
KHSRP-213	ENST00000619396	FAM221B	A6H8Z2	402 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	MCIDAS	D6RGH6	385 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	ULK3	Q6PHR2	472 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	LRRC61	Q9BV99	259 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	OR51J1	Q9H342	316 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	SPATA2	Q9UM82	520 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	GATB	O75879	557 aa	Known RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	NAA10	P41227	235 aa	Predicted RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	FAM53B	Q14153	422 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	RNASE12	Q5GAN4	147 aa	Known RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	CD276	Q5ZPR3	534 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	RPL22L1	Q6P5R6	122 aa	Known RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	UNQ9370/PRO34162	Q6UXP9	181 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	ESPNL	Q6ZVH7	1005 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	OR51Q1	Q8NH59	317 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	CACNG6	Q9BXT2	260 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	ING4	Q9UNL4	249 aa		27.53	■■■□□ 2
KHSRP-213	ENST00000619396	MRPS7	Q9Y2R9	242 aa	Known RBP	27.53	■■■□□ 2
KHSRP-213	ENST00000619396	GSTZ1	O43708	216 aa	Predicted RBP	27.52	■■■□□ 2
KHSRP-213	ENST00000619396	IGLV3-19	P01714	112 aa		27.52	■■■□□ 2
KHSRP-213	ENST00000619396	SLITRK4	Q8IW52	837 aa		27.52	■■■□□ 2
KHSRP-213	ENST00000619396	OR14A16	Q8NHC5	309 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms