RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 HMGA1P17096 107 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 PYCR1P32322 319 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ARHGDIBP52566 201 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 PSMD4P55036 377 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 POU4F2Q12837 409 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ILF3Q12906 894 aaKnown RBP eCLIP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 OR7E24Q6IFN5 339 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 LIN54Q6MZP7 749 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 FAM199XQ6PEV8 388 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 RFLNAQ6ZTI6 216 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SLC36A1Q7Z2H8 476 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 FAM122BQ7Z309 247 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 NRMQ8IXM6 262 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CFAP206Q8IYR0 622 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 OR14A16Q8NHC5 309 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 THAP6Q8TBB0 222 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 KISS1RQ969F8 398 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SMIM19Q96E16 107 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ORAI3Q9BRQ5 295 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 SUV39H2Q9H5I1 410 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 ZCCHC3Q9NUD5 404 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 TAS2R8Q9NYW2 309 aa9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CARHSP1Q9Y2V2 147 aaKnown RBP9.99□□□□□ -0.81
UPF3A-212ENST00000619079 CDHR4A6H8M9 788 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PYCARD-AS1I3L0S3 204 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SIGLEC5O15389 551 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 TSPAN6O43657 245 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 FMO6PO60774 539 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PCDH8O95206 1070 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SBK2P0C263 348 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 S100PP25815 95 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PREPP48147 710 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PTH2RP49190 550 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 FNTBP49356 437 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ARFIP1P53367 373 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SORDQ00796 357 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SIGLEC14Q08ET2 396 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SMAD4Q13485 552 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SERTAD2Q14140 314 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SMAD2Q15796 467 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 C18orf63Q68DL7 685 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 RPL13AP3Q6NVV1 102 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 NANPQ8TBE9 248 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 EXOSC8Q96B26 276 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 WDR89Q96FK6 387 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 CALML5Q9NZT1 146 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ST6GALNAC2Q9UJ37 374 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 AK6Q9Y3D8 172 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM202A6NGA9 273 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PLPP1O14494 284 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 IMPA2O14732 288 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OGG1O15527 345 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 EIF1BO60739 113 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OR2F2O95006 317 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 C1orf105O95561 183 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 FGF19O95750 216 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OLFM2O95897 454 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 POU2F2P09086 479 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ACAA1P09110 424 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 BMP7P18075 431 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 NOS3P29474 1203 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 EIF1P41567 113 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 P2RX1P51575 399 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OR12D2P58182 307 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 RAB5BP61020 215 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ACTA2P62736 377 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ACTG2P63267 376 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OR2F1Q13607 317 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 MELKQ14680 651 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 PAN3Q58A45 887 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF805Q5CZA5 627 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 MANEAQ5SRI9 462 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 KHDRBS2Q5VWX1 349 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 C3orf33Q6P1S2 294 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM64Q6YI46 380 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 KCNRGQ8N5I3 272 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 C7orf57Q8NEG2 295 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 OR52B4Q8NGK2 314 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SLC25A38Q96DW6 304 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 TRMT2BQ96GJ1 504 aaKnown RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-212ENST00000619079 TMEM138Q9NPI0 162 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 CD84Q9UIB8 345 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 SH2B3Q9UQQ2 575 aa9.98□□□□□ -0.81
UPF3A-212ENST00000619079 DENND4AQ7Z401 1863 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 OR6C74A6NCV1 312 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 IFITM5A6NNB3 132 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 MBTPS2O43462 519 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 SPI1P17947 270 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 DCTDP32321 178 aa9.97□□□□□ -0.81
UPF3A-212ENST00000619079 CCR2P41597 374 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms