RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLC13A4Q9UKG4 626 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 RTTNQ86VV8 2226 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 MPDZO75970 2070 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 KIAA1324LA8MWY0 1029 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF814B7Z6K7 855 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 SERPINB7O75635 380 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 GOSR1O95249 250 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 OPN1SWP03999 348 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 RGS8P57771 180 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 SLC35A1P78382 337 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 RBBP4Q09028 425 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 CYLC2Q14093 348 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 STAC2Q6ZMT1 411 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 NET1Q7Z628 596 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 CXorf67Q86X51 503 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 WFDC11Q8NEX6 87 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 OR10A6Q8NH74 314 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 LRRC58Q96CX6 371 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF226Q9NYT6 803 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 C6orf203Q9P0P8 240 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 RPS6KB2Q9UBS0 482 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 TESQ9UGI8 421 aaKnown RBP14.19□□□□□ -0.14
BRCA1-228ENST00000618469 TRAPPC4Q9Y296 219 aa14.19□□□□□ -0.14
BRCA1-228ENST00000618469 LOC100653049A0A140TA62 436 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF716A6NP11 495 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 TMEM229AB2RXF0 380 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 RAMP1O60894 148 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 KRT34O76011 436 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 HRGP04196 525 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 FPR1P21462 350 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 DNASE1P24855 282 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 EDNRAP25101 427 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 HTR2AP28223 471 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 PCGF2P35227 344 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 OR3A2P47893 321 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 PCBP3P57721 371 aaKnown RBP14.18□□□□□ -0.14
BRCA1-228ENST00000618469 DMTNQ08495 405 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 OR7A5Q15622 319 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 RABL3Q5HYI8 236 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 GALNT5Q7Z7M9 940 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 ATG4DQ86TL0 474 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-228ENST00000618469 CCDC103Q8IW40 242 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 SMYD1Q8NB12 490 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 BHLHE22Q8NFJ8 381 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-228ENST00000618469 NINJ1Q92982 152 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 ACTR6Q9GZN1 396 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 FAM107BQ9H098 131 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 PIF1Q9H611 641 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 PRSS50Q9UI38 385 aa14.18□□□□□ -0.14
BRCA1-228ENST00000618469 IGKV3D-15A0A087WSY6 115 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 A0A1B0GWA3 101 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 LIPT2A6NK58 231 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ELOA3DA6NLF2 546 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 A8MVM7 634 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 SLC22A2O15244 555 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 EIF1BO60739 113 aaKnown RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 GCM2O75603 506 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 MFN2O95140 757 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 GPIP06744 558 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 PSMB1P20618 241 aaKnown RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 CRYGSP22914 178 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ADSLP30566 484 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 CEACAM7Q14002 265 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 PDK3Q15120 406 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ELOA3BQ3SY89 546 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 OTUD3Q5T2D3 398 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 C1orf140Q5VVS0 124 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 NANOGP8Q6NSW7 305 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF100Q8IYN0 542 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 GABRG1Q8N1C3 465 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 PCYOX1LQ8NBM8 494 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ELOA3Q8NG57 546 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 OR8J3Q8NGG0 315 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 OR52E4Q8NGH9 312 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 RCN3Q96D15 328 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 NAA11Q9BSU3 229 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 TAPBPLQ9BX59 468 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 POTEKPQ9BYX7 375 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 NANOGQ9H9S0 305 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 ADPRHL2Q9NX46 363 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 PRDM4Q9UKN5 801 aa14.17□□□□□ -0.14
BRCA1-228ENST00000618469 NOSIPQ9Y314 301 aaKnown RBP14.17□□□□□ -0.14
BRCA1-228ENST00000618469 FREM1Q5H8C1 2179 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 M0R3H8 397 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 SIAH2O43255 324 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 AKR7A3O95154 331 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 AHSA1O95433 338 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 ADAP00813 363 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PPP3CBP16298 524 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 IL32P24001 234 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 SLC16A1P53985 500 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 SEC24CP53992 1094 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 H3F3AP84243 136 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 TSC22D1Q15714 1073 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 VMACQ2NL98 169 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 ALG10BQ5I7T1 473 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms