RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 IGHV3-9P01782 118 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 AGKQ53H12 422 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 GCNT6Q5T4J0 391 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 CASP12Q6UXS9 341 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 MSRB3Q8IXL7 192 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 ZNF433Q8N7K0 673 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-228ENST00000617771 SLC35B4Q969S0 331 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 C18orf12Q96KH6 178 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 GSX2Q9BZM3 304 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 RABEP2Q9H5N1 569 aa22.26■■□□□ 1.15
VEGFA-228ENST00000617771 CIB4A0PJX0 185 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 LIPT2A6NK58 231 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 A8MVM7 634 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 PGM3O95394 542 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 PRG2P13727 222 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 ADSLP30566 484 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-228ENST00000617771 CEACAM7Q14002 265 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 OR7A5Q15622 319 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 PAGE3Q5JUK9 113 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 OTUD3Q5T2D3 398 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-228ENST00000617771 YTHDF3Q7Z739 585 aaKnown RBP22.25■■□□□ 1.15
VEGFA-228ENST00000617771 SERPINA11Q86U17 422 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 IGFBPL1Q8WX77 278 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 STON2Q8WXE9 905 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 TAPBPLQ9BX59 468 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 SLC52A3Q9NQ40 469 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 TAS2R16Q9NYV7 291 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 SLAMF8Q9P0V8 285 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 MALT1Q9UDY8 824 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 CORO2BQ9UQ03 480 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 CHST2Q9Y4C5 530 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 FLVCR1Q9Y5Y0 555 aa22.25■■□□□ 1.15
VEGFA-228ENST00000617771 FREM1Q5H8C1 2179 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 OR5H1A6NKK0 313 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 CCT8L1PA6NM43 557 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 ARAFP10398 606 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 ETS2P15036 469 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 H2AFXP16104 143 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-228ENST00000617771 NTF4P34130 210 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 PTH2RP49190 550 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 BSPH1Q075Z2 132 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 SLC17A1Q14916 467 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 SEZ6L2Q6UXD5 910 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 BIVMQ86UB2 503 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 FBXW5Q969U6 566 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 VAPAQ9P0L0 249 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 UPB1Q9UBR1 384 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 GMEB1Q9Y692 573 aa22.24■■□□□ 1.15
VEGFA-228ENST00000617771 A0A1W2PP18 115 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 RAD51DO75771 328 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 PAX1P15863 534 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 FAPQ12884 760 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 BNIP2Q12982 314 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 KRT73Q86Y46 540 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 NFKBIDQ8NI38 313 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 C3orf49Q96BT1 292 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 SPATA5L1Q9BVQ7 753 aa22.23■■□□□ 1.15
VEGFA-228ENST00000617771 SF3B5Q9BWJ5 86 aaKnown RBP22.23■■□□□ 1.15
VEGFA-228ENST00000617771 GSX1Q9H4S2 264 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-228ENST00000617771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-228ENST00000617771 DPRXA6NFQ7 191 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 AQP7P3A6NL99 342 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 EVPLLA8MZ36 301 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 AKR7A3O95154 331 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 INHBBP09529 407 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 PRKAR1BP31321 381 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 CDK6Q00534 326 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 ZNF672Q499Z4 452 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-228ENST00000617771 C1orf140Q5VVS0 124 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 OR7E24Q6IFN5 339 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 REEP3Q6NUK4 255 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 ATG4DQ86TL0 474 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-228ENST00000617771 LSRQ86X29 649 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-228ENST00000617771 TMEM99Q8N816 258 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 LILRB1Q8NHL6 650 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-228ENST00000617771 STK35Q8TDR2 534 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 TMEM45BQ96B21 275 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 Q96MF0 132 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 PIF1Q9H611 641 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 TRIM33Q9UPN9 1127 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 LAMP3Q9UQV4 416 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 DSCAMO60469 2012 aa22.22■■□□□ 1.15
VEGFA-228ENST00000617771 TRBV5-3A0A0A0MS03 114 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 FRS3O43559 492 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 RPS4XP62701 263 aaKnown RBP22.21■■□□□ 1.15
VEGFA-228ENST00000617771 OR9K2Q8NGE7 335 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 THOC1Q96FV9 657 aaKnown RBP22.21■■□□□ 1.15
VEGFA-228ENST00000617771 BDH2Q9BUT1 245 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 TMEM38AQ9H6F2 299 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 ZNF701Q9NV72 531 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-228ENST00000617771 ADPRHL2Q9NX46 363 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 RPS6KB2Q9UBS0 482 aa22.21■■□□□ 1.15
VEGFA-228ENST00000617771 LEF1Q9UJU2 399 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-228ENST00000617771 MAP1AP78559 2803 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-228ENST00000617771 ZFHX3Q15911 3703 aa22.2■■□□□ 1.14
VEGFA-228ENST00000617771 TMEM229AB2RXF0 380 aa22.2■■□□□ 1.14
VEGFA-228ENST00000617771 SLC6A2P23975 617 aa22.2■■□□□ 1.14
VEGFA-228ENST00000617771 TMEM225Q6GV28 225 aa22.2■■□□□ 1.14
VEGFA-228ENST00000617771 GPAT4Q86UL3 456 aa22.2■■□□□ 1.14
VEGFA-228ENST00000617771 KBTBD8Q8NFY9 601 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms