RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
TCF4-248ENST00000616053 COQ10BQ9H8M1 238 aa11.83□□□□□ -0.52
TCF4-248ENST00000616053 A0A0D9SEW6 157 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 TRAPPC13A5PLN9 417 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 NDUFB2O95178 105 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 CYP4V2Q6ZWL3 525 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 FOXN4Q96NZ1 517 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ARRDC1-AS1Q9H2J1 176 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 EGLN3Q9H6Z9 239 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ZNF395Q9H8N7 513 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 SIRT5Q9NXA8 310 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 CPNE7Q9UBL6 633 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 RNF150Q9ULK6 438 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 GPR171O14626 319 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 TIA1P31483 386 aaKnown RBP eCLIP11.82□□□□□ -0.52
TCF4-248ENST00000616053 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 CDH26Q8IXH8 852 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 INPP4AQ96PE3 977 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 TIMM29Q9BSF4 260 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 IDH3AP50213 366 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 PPIAP62937 165 aaKnown RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 PIN1Q13526 163 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 TESK1Q15569 626 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 GLB1L2Q8IW92 636 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 OR52B6Q8NGF0 335 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 MS4A4EQ96PG1 132 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 NIPAL2Q9H841 368 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 MOB1AQ9H8S9 216 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 SPTBP11277 2137 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 SCN2AQ99250 2005 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 RFC3P40938 356 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ELP2Q6IA86 826 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 CARFQ8N187 725 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 GATA5Q9BWX5 397 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 TP63Q9H3D4 680 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 RNF24Q9Y225 148 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 TUBA4AP68366 448 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 CXADRP78310 365 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 MST1RQ04912 1400 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 RAB3DO95716 219 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 GPR148Q8TDV2 347 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ST8SIA4Q92187 359 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ZUFSPQ96AP4 578 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 MRAP2Q96G30 205 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 ALG12Q9BV10 488 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 SDCBP2Q9H190 292 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
TCF4-248ENST00000616053 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
TCF4-248ENST00000616053 LOC102723971A0A1B0GUV8 181 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 NXPH3O95157 252 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 F3P13726 295 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ARL2P36404 184 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SLC10A6Q3KNW5 377 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 TMEM31Q5JXX7 168 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ZNF788Q6ZQV5 615 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ZNF595Q8IYB9 648 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 OR5D16Q8NGK9 328 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 OR13C5Q8NGS8 318 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 OR13C2Q8NGS9 318 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 OR14A16Q8NHC5 309 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SGMS2Q8NHU3 365 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ABCC3O15438 1527 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 RFPL1O75677 317 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 NPEPL1Q8NDH3 523 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 LNX1Q8TBB1 728 aaPredicted RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 CPNE4Q96A23 557 aaPredicted RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 CRLF2Q9HC73 371 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SLC45A1Q9Y2W3 748 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 CD48P09326 243 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 UFM1P61960 85 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 HYAL4Q2M3T9 481 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 RANBP10Q6VN20 620 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SLC38A1Q9H2H9 487 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SLCO3A1Q9UIG8 710 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ACRV1P26436 265 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 WDR4P57081 412 aaKnown RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 PRAMEF5Q5TYX0 476 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 PRAMEF6Q5VXH4 476 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SYPL2Q5VXT5 272 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SFRP4Q6FHJ7 346 aaPredicted RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 OR4F15Q8NGB8 312 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 DNAJC13O75165 2243 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 HSD17B6O14756 317 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ADAM12O43184 909 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 LDB3O75112 727 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 FUT1P19526 365 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 DTYMKP23919 212 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 MVKQ03426 396 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 DOC2BQ14184 412 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 ZNF791Q3KP31 576 aaPredicted RBP11.81□□□□□ -0.52
TCF4-248ENST00000616053 LRRC10Q5BKY1 277 aa11.81□□□□□ -0.52
TCF4-248ENST00000616053 SIRT6Q8N6T7 355 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms