RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CYB561D2O14569 222 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ATP6V0E1O15342 81 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TOX3O15405 576 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 EMC8O43402 210 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 B4GAT1O43505 415 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 XRCC2O43543 280 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GATCO43716 136 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 IDH3BO43837 385 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SH3BGRLO75368 114 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PRKRAO75569 313 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 FARS2O95363 451 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TNNC2P02585 160 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 IFNA6P05013 189 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ALDOBP05062 364 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 HMGN1P05114 100 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GPIP06744 558 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC35E2BP0CK96 405 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC35E2P0CK97 266 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GIMD1P0DJR0 217 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SMIM18P0DKX4 95 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MBL2P11226 248 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ANXA3P12429 323 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 POLR2EP19388 210 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CNR1P21554 472 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TBXA2RP21731 343 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 BGNP21810 368 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 AADACP22760 399 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GABRR2P28476 465 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PRDX3P30048 256 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 KDELR2P33947 212 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 UGT1A3P35503 534 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MMP12P39900 470 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC1A2P43004 574 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 HTR5AP47898 357 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CSNK1DP48730 415 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TGM4P49221 684 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TUFMP49411 452 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CLDN15P56746 228 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CLDN17P56750 224 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 RAB4BP61018 213 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ARF6P62330 175 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 RPL10AP62906 217 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ERVK-25P63136 954 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MAT1AQ00266 395 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GPR17Q13304 367 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CEACAM7Q14002 265 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ALX1Q15699 326 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 KYAT1Q16773 422 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PPP1R3AQ16821 1122 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 KLHL38Q2WGJ6 581 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 NDUFAF6Q330K2 333 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF528Q3MIS6 628 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC22A6Q4U2R8 563 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 C2CD6Q53TS8 623 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF542PQ5EBM4 170 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 COQ5Q5HYK3 327 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SAMD4BQ5PRF9 694 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ADAMTSL4-AS1Q5T5F5 129 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 C1orf189Q5VU69 101 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SUSD4Q5VX71 490 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF776Q68DI1 518 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 DMKNQ6E0U4 476 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR4A47Q6IF82 309 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRRC74BQ6ZQY2 392 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 USP50Q70EL3 339 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MOB2Q70IA6 237 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SSX6Q7RTT6 188 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF554Q86TJ5 538 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PRUNE1Q86TP1 453 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 RANBP3LQ86VV4 465 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CENPSQ8N2Z9 138 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 KIF2BQ8N4N8 673 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TBC1D19Q8N5T2 526 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 BMPERQ8N8U9 685 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 C8orf31Q8N9H6 132 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 TTC29Q8NA56 475 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR2L3Q8NG85 312 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR6Q1Q8NGQ2 317 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR1F12Q8NHA8 337 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 RDH11Q8TC12 318 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MRAPQ8TCY5 172 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 GPR151Q8TDV0 419 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRRC15Q8TF66 581 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PHF10Q8WUB8 498 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 PYDC1Q8WXC3 89 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 FAM3CQ92520 227 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 DAZLQ92904 295 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 STMN2Q93045 179 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 CPNE4Q96A23 557 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 UPRTQ96BW1 309 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MRPL53Q96EL3 112 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SDSLQ96GA7 329 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 NSL1Q96IY1 281 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 RNF170Q96K19 258 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC38A2Q96QD8 506 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 XPO6Q96QU8 1125 aaKnown RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 MCCC1Q96RQ3 725 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 ATOH8Q96SQ7 321 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 NDNQ99608 321 aa2.24□□□□□ -2.05
HMGB1P24-202ENST00000615653 AGPAT1Q99943 283 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms