RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GPANK1O95872 356 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 F13BP05160 661 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 SNRPBP14678 240 aaKnown RBP12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 CD1CP29017 333 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 AQP2P41181 271 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 GABRA4P48169 554 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 SFXN4Q6P4A7 337 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 IZUMO1Q8IYV9 350 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 RDH10Q8IZV5 341 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 SGTBQ96EQ0 304 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 PELI1Q96FA3 418 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 Q96M85 177 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 GAL3ST4Q96RP7 486 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 JAM3Q9BX67 310 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 HDHD2Q9H0R4 259 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 NXF5Q9H1B4 397 aaKnown RBP12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 GNG8Q9UK08 70 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 ANKRD61A6NGH8 418 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 PRAMEF2O60811 474 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 MST1P26927 711 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 SHISA6Q6ZSJ9 500 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 GPR135Q8IZ08 494 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 LSMEM1Q8N8F7 131 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF511Q8NB15 262 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 FRMD6Q96NE9 622 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 FOXQ1Q9C009 403 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 C14orf105Q9NVL8 296 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 ST6GALNAC2Q9UJ37 374 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 LYRM1O43325 122 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 PLPP2O43688 288 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 IDH3BO43837 385 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 NDUFB2O95178 105 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF141Q15928 474 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 AHCYL2Q96HN2 611 aaKnown RBP12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 FOXN4Q96NZ1 517 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 ABHD1Q96SE0 405 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 TRPV5Q9NQA5 729 aa12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 AK6Q9Y3D8 172 aaKnown RBP12.89□□□□□ -0.35
PCDHGA3-202ENST00000612467 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 CLDN4O14493 209 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 QPRTQ15274 297 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 BCL2A1Q16548 175 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZFP69Q49AA0 526 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 SLC25A18Q9H1K4 315 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 MRPS33Q9Y291 106 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 ALG5Q9Y673 324 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 A0A087WUJ7 227 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 A0A1B0GTH9 108 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 DCTN6O00399 190 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 EEF1E1O43324 174 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 DDOSTP39656 456 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 MTNR1BP49286 362 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 BLKP51451 505 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 OR1D5P58170 312 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 VWA2Q5GFL6 755 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 C1orf189Q5VU69 101 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 HBMQ6B0K9 141 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 DMKNQ6E0U4 476 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF595Q8IYB9 648 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 TCTN2Q96GX1 697 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 HSPA12BQ96MM6 686 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 RPRD1BQ9NQG5 326 aaKnown RBP12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
PCDHGA3-202ENST00000612467 FER1L5A0AVI2 2057 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 SEC14L5O43304 696 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 ADRB1P08588 477 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 ATF1P18846 271 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 CD38P28907 300 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 CDKN2AP42771 156 aaKnown RBP12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 INPP1P49441 399 aa12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 CSNK1EP49674 416 aaKnown RBP12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
PCDHGA3-202ENST00000612467 MRPS15P82914 257 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms