RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CLCA3PQ9Y6N3 262 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 VPS13AQ96RL7 3174 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SLC6A1P30531 599 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 SLC6A6P31641 620 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 ATP12AP54707 1039 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 EPHA4P54764 986 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 E2F1Q01094 437 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 FAM209AQ5JX71 171 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 LINC00114Q6XXX2 140 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 MS4A15Q8N5U1 240 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 OR51A7Q8NH64 312 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 SMPDL3BQ92485 455 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 FSCN3Q9NQT6 498 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 DNAJB12Q9NXW2 375 aaKnown RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 ZMAT5Q9UDW3 170 aaKnown RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 PILRBQ9UKJ0 227 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 TLCD2A6NGC4 264 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 NUDT21O43809 227 aaKnown RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 PPP1R3DO95685 299 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 IFNGP01579 166 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 EIF4EP06730 217 aaKnown RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 NRG3P56975 720 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 PSG6Q00889 435 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 PAMR1Q6UXH9 720 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 LSRQ86X29 649 aaPredicted RBP13.49□□□□□ -0.25
CDH1-213ENST00000612417 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 C17orf47Q8NEP4 570 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 OR4M1Q8NGD0 313 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 OR52R1Q8NGF1 315 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 BEX2Q9BXY8 128 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 PDE7BQ9NP56 450 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 RASD1Q9Y272 281 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
CDH1-213ENST00000612417 C1QBP02746 253 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 CFIP05156 583 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 NGFRP08138 427 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 MRPL3P09001 348 aaKnown RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 CLUP10909 449 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ARSBP15848 533 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 GLB1P16278 677 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 S1PR1P21453 382 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 PITPNBP48739 271 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 SLC16A1P53985 500 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 RRAS2P62070 204 aaPredicted RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 BTG1P62324 171 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 SHBQ15464 509 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 SNAP47Q5SQN1 464 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 CEACAM19Q7Z692 300 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 MAML2Q8IZL2 1156 aaPredicted RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 ARHGEF39Q8N4T4 335 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 SAMD12Q8N8I0 201 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 OR9A4Q8NGU2 314 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 RFT1Q96AA3 541 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 TNFRSF13CQ96RJ3 184 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 WACQ9BTA9 647 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ST6GALNAC2Q9UJ37 374 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 TNRC6BQ9UPQ9 1833 aaKnown RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 ADAMTS9Q9P2N4 1935 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 TRAV1-2A0A0B4J238 106 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 J3QLW9 94 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ADAM11O75078 769 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 RDH16O75452 317 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ZNF19P17023 458 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ARL4DP49703 201 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 GZMKP49863 264 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 OR10A3P58181 314 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 OR12D2P58182 307 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 SLC3A1Q07837 685 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 FAPQ12884 760 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 TNK1Q13470 666 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 EFR3AQ14156 821 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 GGTLC2Q14390 218 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 PLA1AQ53H76 456 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 DGAT2L6Q6ZPD8 337 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 CYB561A3Q8NBI2 242 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 THAP7Q9BT49 309 aaPredicted RBP13.48□□□□□ -0.25
CDH1-213ENST00000612417 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
CDH1-213ENST00000612417 MYO15AQ9UKN7 3530 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 IGHV1OR21-1A0A087WYE8 117 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 OR6C70A6NIJ9 312 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms