RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MOKQ9UQ07 419 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 TRAPPC4Q9Y296 219 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 ITM2AO43736 263 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 NR2F1P10589 423 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 IL7RP16871 459 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 SRD5A1P18405 259 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 CXCR1P25024 350 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 NTF4P34130 210 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 GZMKP49863 264 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 CLNS1AP54105 237 aaKnown RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 FUT5Q11128 374 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 OR7A5Q15622 319 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 SMU1Q2TAY7 513 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 SPANXN4Q5MJ08 99 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 VHLLQ6RSH7 139 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 IL17RELQ6ZVW7 336 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 SPATA19Q7Z5L4 167 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 ABHD12BQ7Z5M8 362 aaPredicted RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 TRIML2Q8N7C3 387 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 C1orf162Q8NEQ5 155 aaPredicted RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTSA-216ENST00000607212 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
CTSA-216ENST00000607212 ANK3Q12955 4377 aaKnown RBP13.02□□□□□ -0.33
CTSA-216ENST00000607212 A0A096LNT2 108 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 LOC100289279A0A1B0GTE1 492 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 CFAP73A6NFT4 308 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ZNF208O43345 1280 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 AKR7A3O95154 331 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 SERPINE1P05121 402 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 GPIP06744 558 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 IMPDH2P12268 514 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 APEHP13798 732 aaKnown RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 CREB1P16220 341 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 LBPP18428 481 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 HNF1AP20823 631 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 MPGP29372 298 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ABCE1P61221 599 aaKnown RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 SLC25A3Q00325 362 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 CEACAM7Q14002 265 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 SYPL1Q16563 259 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 DPY19L1Q2PZI1 675 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 FAM174BQ3ZCQ3 159 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 HIKESHIQ53FT3 197 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 FAM166AQ6J272 317 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ZNF621Q6ZSS3 439 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 CADM2Q8N3J6 435 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ARIH2OSQ8N7S6 290 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 PNPT1Q8TCS8 783 aaKnown RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 AURKBQ96GD4 344 aaPredicted RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 ZIM3Q96PE6 472 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 PANX1Q96RD7 426 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ROPN1BQ9BZX4 212 aaPredicted RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 ROPN1Q9HAT0 212 aaPredicted RBP13.01□□□□□ -0.33
CTSA-216ENST00000607212 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
CTSA-216ENST00000607212 ZC3H12DA2A288 527 aaKnown RBP13□□□□□ -0.33
CTSA-216ENST00000607212 E9PBE3 544 aa13□□□□□ -0.33
CTSA-216ENST00000607212 HMGN4O00479 90 aa13□□□□□ -0.33
CTSA-216ENST00000607212 F12P00748 615 aaPredicted RBP13□□□□□ -0.33
CTSA-216ENST00000607212 GUSBP08236 651 aa13□□□□□ -0.33
CTSA-216ENST00000607212 SLC1A3P43003 542 aa13□□□□□ -0.33
CTSA-216ENST00000607212 RPL14P50914 215 aaKnown RBP13□□□□□ -0.33
CTSA-216ENST00000607212 COPZ1P61923 177 aa13□□□□□ -0.33
CTSA-216ENST00000607212 SLC17A1Q14916 467 aa13□□□□□ -0.33
CTSA-216ENST00000607212 MRPL2Q5T653 305 aaKnown RBP13□□□□□ -0.33
CTSA-216ENST00000607212 PAQR6Q6TCH4 344 aa13□□□□□ -0.33
CTSA-216ENST00000607212 CMIPQ8IY22 773 aa13□□□□□ -0.33
CTSA-216ENST00000607212 PEX5LQ8IYB4 626 aa13□□□□□ -0.33
CTSA-216ENST00000607212 TMEM99Q8N816 258 aa13□□□□□ -0.33
CTSA-216ENST00000607212 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
CTSA-216ENST00000607212 TESCQ96BS2 214 aa13□□□□□ -0.33
CTSA-216ENST00000607212 ZBTB18Q99592 522 aa13□□□□□ -0.33
CTSA-216ENST00000607212 NUF2Q9BZD4 464 aa13□□□□□ -0.33
CTSA-216ENST00000607212 SAP130Q9H0E3 1048 aa13□□□□□ -0.33
CTSA-216ENST00000607212 TMEM45AQ9NWC5 275 aa13□□□□□ -0.33
CTSA-216ENST00000607212 TMEM160Q9NX00 188 aa13□□□□□ -0.33
CTSA-216ENST00000607212 RAP2CQ9Y3L5 183 aa13□□□□□ -0.33
CTSA-216ENST00000607212 CCDC154A6NI56 674 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 ZNF587BE7ETH6 402 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 CRYAAP02489 173 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 GSNP06396 782 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 DBIP07108 87 aaKnown RBP12.99□□□□□ -0.33
CTSA-216ENST00000607212 CHRM4P08173 479 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
CTSA-216ENST00000607212 SLC1A6P48664 564 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 SRSF2Q01130 221 aaKnown RBP12.99□□□□□ -0.33
CTSA-216ENST00000607212 CASP8Q14790 479 aa12.99□□□□□ -0.33
CTSA-216ENST00000607212 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms